Take a look to your web server error log file. Sometimes PHP errors appear 
there and you may learn something from that.

Look to the source of the wiki generated page to see if the structure of the 
jmolApplet makes sense.

Create a really simple page with only an applet, no links nor text and try to 
make it work.

Jaim
--
Dr Jaime Prilusky
Head Bioinformatics
R&D Bioinformatics and Data Management
Department of Biological Services
Weizmann Institute of Science
76100 Rehovot – Israel

mail: jaime.prilu...@weizmann.ac.il
tel: 972-8-9344959
fax: 972-8-9344113

OCA, http://oca.weizmann.ac.il (the protein structure/function database)
Proteopedia, http://proteopedia.org (because life has more than 2D)

From: Kilian Baerwinkel 
<kilian.baerwin...@uni-bayreuth.de<mailto:kilian.baerwin...@uni-bayreuth.de>>
Reply-To: 
<jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>>
Date: Thu, 24 Nov 2011 15:23:43 +0100
To: <jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>>
Subject: Re: [Jmol-users] MediaWiki Plugin

Hello Jaime

Thank you very much for your answer... On line 833, there was no & at the third 
parameter, but i fond some more &$parser and removed the &. This did not make 
the applet appear, but now i can see a link if I insert a <jmolfile>. Still 
nothing happens if the link is clicked.

Any ideas?

Best

Kilian

On 24 November 2011 14:34, Jaime Prilusky 
<jaime.prilu...@weizmann.ac.il<mailto:jaime.prilu...@weizmann.ac.il>> wrote:
On line 833 of the file Jmol.body.php remove the '&' from the third parameter 
of the function jmolTag()

Jaim
--
Dr Jaime Prilusky
Head Bioinformatics
R&D Bioinformatics and Data Management
Department of Biological Services
Weizmann Institute of Science
76100 Rehovot – Israel

mail: jaime.prilu...@weizmann.ac.il<mailto:jaime.prilu...@weizmann.ac.il>
tel: 972-8-9344959
fax: 972-8-9344113

OCA, http://oca.weizmann.ac.il (the protein structure/function database)
Proteopedia, http://proteopedia.org (because life has more than 2D)

From: Kilian Baerwinkel 
<kilian.baerwin...@uni-bayreuth.de<mailto:kilian.baerwin...@uni-bayreuth.de>>
Reply-To: 
<jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>>
Date: Thu, 24 Nov 2011 14:15:24 +0100
To: <jmol-users@lists.sourceforge.net<mailto:jmol-users@lists.sourceforge.net>>
Subject: [Jmol-users] MediaWiki Plugin

Dear all,

I am trying to use Jmol within our Wiki. I have installed the Mediawiki 
extension according to the documentation, placing both the source files of the 
extension and the files of Jmol in a Jmol folder within the extensions folder 
of mediawiki.

Having set
require_once("extensions/Jmol/Jmol.php");
the source code of an applet is no longer displayed, so the parser seems so 
acknowledge the presence of known tags,but no applet is displayed.

Did anyone come across this issue, or does anyone see an obvious mistake of 
mine?

Many thanks for your help

Kilian Baerwinkel



--
______

MSc. Chem. Kilian Bärwinkel

Lehrstuhl für Anorganische Chemie I
Fakultät NW 1
Universität Bayreuth
Universitätsstr. 30
95447 Bayreuth

Tel:    +49 921 55 - 4387<tel:%2B49%20921%2055%20-%204387>
Fax:    +49 921 55 - 2788<tel:%2B49%20921%2055%20-%202788>

e-mail: 
kilian.baerwin...@uni-bayreuth.de<mailto:kilian.baerwin...@uni-bayreuth.de>

http://www.senker.uni-bayreuth.de

------------------------------------------------------------------------------ 
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definitive record of customers, application performance, security threats, 
fraudulent activity, and more. Splunk takes this data and makes sense of it. IT 
sense. And common sense. 
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contains a definitive record of customers, application performance,
security threats, fraudulent activity, and more. Splunk takes this
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
_______________________________________________
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--
______

MSc. Chem. Kilian Bärwinkel

Lehrstuhl für Anorganische Chemie I
Fakultät NW 1
Universität Bayreuth
Universitätsstr. 30
95447 Bayreuth

Tel:    +49 921 55 - 4387
Fax:    +49 921 55 - 2788

e-mail: 
kilian.baerwin...@uni-bayreuth.de<mailto:kilian.baerwin...@uni-bayreuth.de>

http://www.senker.uni-bayreuth.de

------------------------------------------------------------------------------ 
All the data continuously generated in your IT infrastructure contains a 
definitive record of customers, application performance, security threats, 
fraudulent activity, and more. Splunk takes this data and makes sense of it. IT 
sense. And common sense. 
http://p.sf.net/sfu/splunk-novd2d_______________________________________________
 Jmol-users mailing list 
Jmol-users@lists.sourceforge.net<mailto:Jmol-users@lists.sourceforge.net> 
https://lists.sourceforge.net/lists/listinfo/jmol-users
------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure 
contains a definitive record of customers, application performance, 
security threats, fraudulent activity, and more. Splunk takes this 
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-users

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