minimize ENERGY
On Wed, Nov 30, 2011 at 5:01 PM, Robert Hanson <[email protected]> wrote:
> Ah, forgot the minimization:
>
> set loglevel 6
> minimize enery
>
> set loglevel 4
> x = script("show minimization")
> print x
>
>
> On Wed, Nov 30, 2011 at 4:25 PM, Spinney, Richard <
> [email protected]> wrote:
>
>> >set loglevel 6
>> >x = script("show minimization")
>> >set loglevel 4
>> >print x
>> >write VAR x "mindata.txt"
>> >
>> >might do it.
>>
>> Gives:
>>
>> Universal Force Field - Rappe, A. K. et. Al.; J. Am. Chem. Soc. (1992)
>> 114(25) p. 10024-10035
>> Jmol Minimization Version 12.1.26 2010-12-07 05:36
>>
>> Initial E = 72995.508 kJ/mol criterion = 0.001000 max steps = 100
>> Step 10 E = 4366.93965 dE = -271.478485
>> .
>> .
>> .
>> Step 64 E = 228.669281 dE = -0.000696
>>
>> STEEPEST DECENT HAS CONVERGED: E = 228.66928 kJ/mol after 64 steps
>>
>>
>> --------------------------------------
>> Dr. Richard Spinney
>> The Ohio State University
>> Department of Chemistry
>> 144 Celeste Laboratory
>> 120 West 18th Ave
>> Columbus, Ohio 43210
>>
>> email: [email protected]
>>
>> Phone: (614) 247 - 6847
>> Fax: (614) 292 - 1685
>>
>>
>>
>>
>> ------------------------------------------------------------------------------
>> All the data continuously generated in your IT infrastructure
>> contains a definitive record of customers, application performance,
>> security threats, fraudulent activity, and more. Splunk takes this
>> data and makes sense of it. IT sense. And common sense.
>> http://p.sf.net/sfu/splunk-novd2d
>> _______________________________________________
>> Jmol-users mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure
contains a definitive record of customers, application performance,
security threats, fraudulent activity, and more. Splunk takes this
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users