That's Jmol script, not JavaScript. Yes, essentially exactly like pyMol.
You can write any macro you want.
2012/3/21 Adrià Cereto Massagué <adrian.cer...@urv.cat>
>
>
> El 21 de març de 2012 1:45, Robert Hanson <hans...@stolaf.edu> ha escrit:
>
> Custom commands can be simply set up by defining a function with that
>> command name. is that what you mean -- sort of a macro?
>>
>>
>>
>> function colorMeBlue(atoms) {
>>
>> color @atoms blue
>>
>> }
>>
>>
>>
>> colorMeBlue {helix}
>>
>>
>>
>>
> Thank you. I have some commands I can implement in JmolScript, and
> therefore defien as functions,
> but I would like to call or execute an external Java method. Can it be
> done?
>
> In PyMol it is possible to map a python function to a script command. Is
> there something similar in Jmol?
>
>
>>
>>
>> 2012/3/20 Adrià Cereto Massagué <adrian.cer...@urv.cat>
>>
>>> Hello,
>>>
>>> I am new to Jmol, and I am developing an application which relies on it
>>> (the Integration.java example has been very useful)
>>>
>>> I want to have some custom commands available from the scripting
>>> console. Is there an easy way for doing so?
>>>
>>> I have tried extending AppConsole and overriding the enterPressed()
>>> method and checking AppConsole.text for the last line, but then I have no
>>> way no clear the custom command from the console unless i call
>>> super.enterPressed(), which prints a script error about (obviously) not
>>> recognizing the command.
>>>
>>> Thank you in advance,
>>>
>>> Adrià
>>>
>>> --
>>> *Adrià Cereto Massagué*
>>> Ph.D Student
>>> Nutrigenomics Research Group
>>> Biochemistry and Biotechnology Department
>>> Building N4, Campus Sescelades
>>> Universitat Rovira i Virgili
>>> Tarragona, Catalonia
>>>
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>>> Important
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>>>
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>>
>>
>> --
>> Robert M. Hanson
>> Professor of Chemistry
>> St. Olaf College
>> 1520 St. Olaf Ave.
>> Northfield, MN 55057
>> http://www.stolaf.edu/people/hansonr
>> phone: 507-786-3107
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
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>
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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