Kumardeep,
I'm unsure of Jmol's ability to read PSE files, but if you are not married
to the superposition software, Superpose from the University of Alberta is
a nice alternative. The output of Superpose is a multi model PDB file,
which you can play with using Jmol's model command.
Cheers, Mike
On Jul 14, 2012 2:20 PM, "Kumardeep Chaudhary" <[email protected]> wrote:
> Hi all
> I am trying to use Jmol applet for representing the 2 aligned pdb files.
> The files have been aligned using DaliLite on the local. but I am unable to
> locate the aligned coordinate file. Basically, DaliLite sends link to its
> own site for Jmol visualization of aligned files. But I want to give link
> to my local web page containg Jmol applet. So how to go for that.
> I tried pymol to align these 2 files and get the session file as .pse
> extension. Is there any way to load this .pse file to jmol ?
>
> Thanks in advance
> Kumardeep
>
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