Hi Andreas,

1) Have you tried to use the TRAJECTORY option of load? (That only works 
if all your models have the same atoms and bonds, but the memory and 
speed improvements are large) Not sure if/how it may be combined with 
DATA.

2) following Rolf's comment,  ZAP may be used to delete models, and I think 
that way it does release the memory used.
http://chemapps.stolaf.edu/jmol/docs/#zap




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