Hello, thank you for answering me.
 
That is pretty much what I did last night, i used load ./methane.sdf but now I 
have to modify the paths for all of the jpg's that I modified. The other 
solution I had in mind was creating a NodeJS server to serve me those files, 
and redirect all the requests from Jmol to localhost, but I'm glad it didn't 
come to that.
Thank you again for your prompt answer.
 
Mihai
 
 

________________________________
 From: Angel Herráez <[email protected]>
To: [email protected] 
Sent: Tuesday, July 31, 2012 8:08 PM
Subject: Re: [Jmol-users] JMOL working offline
  
Hello Mihai 

Jmol can indeed be used offline. Only a handful of features require online 
connection (yours is an example).

> /*file*/"MOL3D::http://cactus.nci.nih.gov/chemical/structure/methane/file?format=sdf&get3d=True";

I suppose you are using
  load $methane

that needs to connect to the Cactus server to retrieve the structure.

What you should do is save the files you need, then load them from local 
folder.

You can either download them from the server or use Jmol signed applet 
popup menu, File > Save a copy

then use
  load myfolder/methane.mol




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