Ah, thank you for spotting that. See
http://chemapps.stolaf.edu/jmol/Jmol-13.zip
http://chemapps.stolaf.edu/jmol/jsmol.zip
On Fri, Mar 15, 2013 at 11:42 AM, Matthew Betts <
[email protected]> wrote:
> Hi,
>
> It looks like P and O bound to P in phosphorylated amino acids are
> incorrectly included in the predefined mainchain atom set, perhaps a
> knock-on from the correct assignment of such atoms to the mainchain of
> nucleic acids?
>
> For example chain A, residue 638 of 3iw4:
>
> select 638a
> # 11 atoms selected
> select 638a and sidechain
> # 3 atoms selected
>
> Can you suggest a work around for this please? I'm trying to select the
> sidechains of all amino acids, modified or not.
>
> Thanks,
>
> Matthew
>
>
> --
> Matthew Betts PhD
> Russell Lab, CellNetworks Excellenz Cluster, University of Heidelberg
> BioQuant room 563, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany
> http://www.russelllab.org/people/matthew/
> [email protected], +49 (0)6221 54 513 61
>
>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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