Hello Aaron I'm interested in your project and will be happy to collaborate with you.
Question: what is exactly the "HP protein folding model" ? Comment: apart from the minimization problem that Bob mentions, the issue is that given the reticular positions, the amino acid residues will not necessarily fit in those "cells". It is not just the problem of rotating them so that they may be bound, but that the size of each residue will not match the size of a single cell in the XYZ net. An also, a realistic polypeptide backbone will not match the 90 degree angles. How do you envisage that? ------------------------------------------------------------------------------ Try New Relic Now & We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, & servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
