Chen,
The menu command is:
isosurface delete resolution 0 molecular map MEP translucent
This hides an important issue that I don't fully understand because of
seemingly inconsistent charge units in various files. The issue is the charge
range of painted colors. The above uses a default range that I don't know.
Angel, do you know the default? By trial and error, I settled on the following:
isosurface resolution 0 molecular color range -.07 .07 map mep translucent
Otis
--
Otis Rothenberger
[email protected]
http://chemagic.com
On May 19, 2013, at 11:49 AM, Angel Herráez wrote:
> Hello Chen
>
> You can try enetering this in the script console just after you use the menu
> option:
>
> show isosurface
>
> amongst the long text displayed, there is a section entitled
> <jvxlIsosurfaceState>
> which has the script that will render the isosurface you have.
>
> As for getting a color, you can include the color definition in your
> isosurface script, but sometimes that is a little tricky, and it is always
> safe and easy to apply color in a second command, like e.g.
>
> isosurface mysurf1 molecular;
> color $mysurf1 translucent green;
>
>
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security visibility with the essential security capabilities. Easily and
efficiently configure, manage, and operate all of your security controls
from a single console and one unified framework. Download a free trial.
http://p.sf.net/sfu/alienvault_d2d
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