Oh, OK. I see that Jmol.js wasn't going into the zip file. See
http://chemapps.stolaf.edu/jmol/Jmol.js
On Sun, Jun 16, 2013 at 9:58 PM, Frieda Reichsman <[email protected]> wrote:
> I'm not trying to use JSmol. I will get there at some point but currently
> I need to stick with Jmol. So-- does that mean there *is* a Jmol.js file I
> should be seeing somewhere?
>
> On Jun 16, 2013, at 9:30 PM, Robert Hanson wrote:
>
> Frieda, I think you are downloading the Jmol files. You want
>
> http://chemapps.stolaf.edu/jmol/jsmol.zip
>
>
>
>
> On Sun, Jun 16, 2013 at 7:37 PM, Frieda Reichsman <[email protected]>wrote:
>
>> I'd be happy to try this out and report back, but neither of those files
>> are included in the downloaded folders, either. Where does one get them?
>>
>>
>> On Jun 16, 2013, at 7:01 PM, Robert Hanson wrote:
>>
>> Hi, Frieda. How are you doing?
>>
>> JSmol does not use Jmol.js. So that's right, you won't find it there. I
>> would appreciate your trying this combo instead:
>>
>> <script type="text/javascript" src="JSmol.min.js"></script>
>> <script type="text/javascript" src="Jmol2.js"></script>
>>
>> Let me know how that goes. For the most part, that will make older pages
>> work as though they had Jmol.js. But there will be a few issues I'm sure
>> with more complicated pages. Read the top comment in Jmol2.js.
>>
>>
>> Bob
>>
>>
>>
>>
>> On Sun, Jun 16, 2013 at 5:14 PM, Frieda Reichsman <[email protected]>wrote:
>>
>>> Thanks Bob, I have downloaded 13.1.15, and 13.1.16_a, but I do not see
>>> the Jmol.js file in these releases. Where do I find the Jmol.js version
>>> that would go with these downloads?
>>>
>>> On Jun 10, 2013, at 7:53 AM, Robert Hanson wrote:
>>>
>>> Frieda, all new features go into Jmol 13.1 only, not Jmol 13.0. Sorry
>>> for not making that clear.
>>>
>>> Also, note that there are already some bug fixes for PyMOL PSE file
>>> reading particularly. See http://chemapps.stolaf.edu/jmol/Jmol-13.zipfor
>>> the latest.
>>>
>>>
>>> On Sun, Jun 9, 2013 at 2:31 PM, Frieda Reichsman <[email protected]>wrote:
>>>
>>>>
>>>> On Apr 29, 2013, at 2:15 PM, Robert Hanson wrote:
>>>> >
>>>> > new feature: set cartoonLadder -- default TRUE (standard Jmol
>>>> rendering of nucleic acids), but when FALSE no bases, just "ladders", like
>>>> PyMOL
>>>>
>>>> Hi Bob,
>>>>
>>>> I'm using the Jmol application, version 13.0.16, and finding that
>>>> cartoonLadder is not recognized as a "set" parameter. Also, I saved a state
>>>> script and it does not appear in the list of set parameters (not sure every
>>>> one is supposed to be listed but it looks like it).
>>>>
>>>> And thanks for implementing this, btw-- it'll be great to have it
>>>> available in Jmol.
>>>>
>>>> Best,
>>>> Frieda
>>>>
>>>>
>>>>
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>>>
>>>
>>>
>>> --
>>> Robert M. Hanson
>>> Larson-Anderson Professor of Chemistry
>>> St. Olaf College
>>> Northfield, MN
>>> http://www.stolaf.edu/people/hansonr
>>>
>>>
>>> If nature does not answer first what we want,
>>> it is better to take what answer we get.
>>>
>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>
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>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>> ------------------------------------------------------------------------------
>> This SF.net email is sponsored by Windows:
>>
>> Build for Windows Store.
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>>
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>>
>>
>>
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>>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> ------------------------------------------------------------------------------
> This SF.net email is sponsored by Windows:
>
> Build for Windows Store.
>
>
> http://p.sf.net/sfu/windows-dev2dev_______________________________________________
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> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
>
>
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>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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