Hello Liu Can you be more specific? That would help.
By "multiple layer", do you mean several models (frames) are loaded together? Or something else? > http://bdb4.ucsd.edu/bind/surflex.jsp?PDB=1GSI&HET=TMP does not behave where not all the atoms and bonds in protein are cartooned. Which parts of the protein are not displayed? I just loaded the pdb into Jmol and I see no problem in the cartoon. Finally, this will not affect, but for your information you do not need to repeat "set appendNew true", and "zoom" applies to all models at the same time, so no need to repeat it. ------------------------------------------------------------------------------ Introducing Performance Central, a new site from SourceForge and AppDynamics. Performance Central is your source for news, insights, analysis and resources for efficient Application Performance Management. Visit us today! http://pubads.g.doubleclick.net/gampad/clk?id=48897511&iu=/4140/ostg.clktrk _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users

