See https://sourceforge.net/projects/jmol/files/
There is a feature change:
FEATURE CHANGE: set wireframeRotation expanded to include bioshapes and
isosurfaces
Bug fixes in 3.2.4 and 3.3.4:
bug fix: set wireframeRotation not working ("inMotion" flag not properly
read in Viewer).
bug fix: CIF reader not processing _ccdc_geom_bond_order records
bug fix: File dialog problems with paths having space
bug fix: GAMESS reader not reading energies
bug fix: TRY failure in a load command followed by a successful load
having a loadScript will pop past the second TRY and crash
Jmol
bug fix: translation not read from state
bug fix: CIF reader does not find Hall name for space groups
bug fix: binding names not included in SHOW MOUSE
bug fix: "single" touch can fire double-click
bug fix: {x}.tensor() command fails when no atom tensors
bug fix: screen repaints were being requested far too frequently
bug fix: set loglevel 6 (debugHigh) not working
bug fix: {*}.tensor("", "id") not implemented
bug fix: {*}.tensor("") not implemented
bug fix: {*}.tensor("adp") fails
bug fix: {*}.symmetry fails when space group is P1
bug fix: atom tensors lost when merging
bug fix: float parser broken in dev_2013.08.07
bug fix: zoom setting lost in state
bug fix: shapeInfo not reporting visibility of isosurface
bug fix: filter lost after CENTROID or PACKED load option
bug fix: set rangeSelected not functional
bug fix: minimization can fail after MMFF switches to UFF.
bug fix: CIF reader fix for no element given "phenyl1" in ZjzxlegN.cif
New Features in 3.3.4:
new feature: set platformSpeed [0 to 10]
-- basically an expanded "set wireframe OFF" with more options
-- only effected during model rotation
(including mouse dragging, spin, vibration, and animation)
-- default value is 10 (all features; no compromises)
-- value >= enables
8 antialiasDisplay (and thus, all features)
7 translucency
6 meshes (contact, draw, isosurface, MO, pmesh,
lcaocartoon, CGO)
5 cartoons, rockets, trace, ribbon
4 geosurfaces
3 ellipsoids
2 wireframe and balls
1 none of the above (same as "set wireframeRotation
off")
0 [reserved for "auto"]
new feature: rotate BEST
new feature: rotate SELECTED BEST
new feature: quaternion("best")
-- delivers actual quaternion
new feature: pop-up menu selection "view...best"
new feature: show ROTATION BEST
-- operates on currently selected atoms
-- reports "{quaternion}"
new feature: show ROTATION VOLUME
-- calculates approximate best box (from 1495 quaternion-based
alternatives)
-- reports "<volume> {dx dy dz}"
-- where <volume> is the volume,
-- and {dx dy dz} are the dimensions, where dx > dy > dz
new feature: COMPARE {atoms} [coords]
new feature: COMPARE {atoms} ATOMS {subset1} [coords1] {subset2} [coords2]
...
new feature: _logfile holds full path to logfile
new feature: reading of incommensurate modulated crystal structures:
new feature: Jana2006 M40/M50 file reading
new feature: MODULATION command -- for modulated structures
-- operates on currently selected set of atoms
-- MODULATION ON
-- MODULATION OFF
-- MODULATION t
-- sets modulation "t" of selected atoms
-- MODULATION PLAY t1 t2
-- animates a once-through sequence of t from t1 to t2
-- MODULATION FPS x.x // may be < 1
-- sets speed of animation
new feature: Jana2006 reader -- reader for http://jana.fzu.cz/
new feature: CIF reader reads incommensurate modulated structures
-- FILTER options include:
-- NOSPECIAL (include special atoms for debugging
-- MODAVERAGE (do not read modulation
-- MODAXES=xyz (select only specific axes -- x, y, and/or z)
-- MODVIB (set positions to average, but enable modulation as if
vibration
-- NOSYM (no symmetry read)
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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