The “Bond/BondSet.js” error appears also on Mac Firefox 25.0.1, but the applet 
continues working. You may see error reports with Firebug.

This might come from lines like this one in Bond.js and other files:

J/modelset/Bond.js:Clazz.superConstructor (this, J.modelset.Bond.BondSet, []);

The call to superConstructor assumes that J, modelset and Bond are directories, 
while BondSet is a file with the ‘.js’ extension.

Jaim


On Nov 26, 2013, at 12:02 AM, Robert Hanson 
<hans...@stolaf.edu<mailto:hans...@stolaf.edu>> wrote:

The "Bond/BondSet.js" message is certainly curious, but it's not a show 
stopper. This appears even on web-site access via Safari. The message just 
after that is the killer, having to do with not being able to load core.z.js. 
Safari (like Chrome or Firefox without special settings) will not allow access 
to local files.

The yellow box should be gone now for Safari hosted access to Jmol. The problem 
was that apparently Safari is no longer accepting the <object> tag. The 
<applet> tag is required so that you can click on the windows and accept the 
website for the applet. Must be a bug, but I have switched JSmol to the applet 
tag when it detects Safari.

There is still a problem with local file reading. It looks to me as though 
Safari is not recognizing local JNLP applications within the browser. Or there 
is some setting we are missing.

Firefox is working fine for Safari local file access, so I concur with Phil and 
suggest we just write off Safari for now.

Bob


On Mon, Nov 25, 2013 at 9:09 AM, Philip Bays 
<pb...@saintmarys.edu<mailto:pb...@saintmarys.edu>> wrote:
I meant this version of Safari, not this version of Jmol!!  Safari has lots of 
quirks right now, I think.  I still am not able to run jmol locally, because I 
get a Safari message that java is not enables, despite the fact that I have it 
enabled anyplace I can find to enable it.  But firefox works fine so that is 
what I will use for the time being.


On Nov 25, 2013, at 10:04 AM, Robert Hanson 
<hans...@stolaf.edu<mailto:hans...@stolaf.edu>> wrote:

Anything you can send me would be helpful. I will test Safari locally here 
today and see what I can find.


On Mon, Nov 25, 2013 at 4:12 AM, Philip Bays 
<pb...@saintmarys.edu<mailto:pb...@saintmarys.edu>> wrote:
Oh, yes.   I see them scroll by as the applet is loading and can see them using 
the SHOW link.  So we will just attribute this to a Safari flaw — like a lot of 
others in this version!!


On Nov 24, 2013, at 5:29 PM, Robert Hanson 
<hans...@stolaf.edu<mailto:hans...@stolaf.edu>> wrote:

There should be a whole flood of messages in Jmol's "Java" console. (Behind the 
applet and visible with the "Info SHOW" link under the applet.) No?

Philip Bays
Emeritus Professor of Chemistry
Saint Mary's College
Notre Dame, IN 46556
pb...@saintmarys.edu<mailto:pb...@saintmarys.edu>



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http://www.stolaf.edu/people/hansonr


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Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900

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