On Thu, Nov 28, 2013 at 12:12 PM, Rolf Huehne <rhue...@fli-leibniz.de>wrote:
> On 11/28/2013 06:15 PM, Robert Hanson wrote:
> > The files are loading, so Jmol is recognizing them as binary. I'll add
> >
> > Jmol._alertNoBinary
> >
> > that you can set false.
> >
> > But, really, you're doing a double send -- once to the relay host in
> > binary, then again in BASE64 to JSmol, then a decoding back into binary.
> So
> > think about if there is a way to avoid that. They are just PDB or mmCIF
> > files, right?
> >
> Yes, for usage with Jmol they are currently gzip-compressed PDB files.
>
> If someone could tell me a way to convince browsers to uncompress
> gzip-compressed CGI output before feeding it into JSmol I would be happy
> to implement it.
>
> Sending them uncompressed instead is not really an option. Especially
> the biological unit files can get very large, even compressed.
> Before I figured out how to activate the binary file loading in JSmol it
> was done this way. But it took very long to load a file with a
> compressed size of ~2 megabyte on a 2 MBit/s connection. Even with the
> double send it was several times faster with activated binary file
> loading of the compressed file.
>
I think your server is not set up to deliver gzipped files automatically.
Perhaps?
>
> Regards,
> Rolf
> --
>
> Rolf Huehne
> Postdoc
>
> Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI)
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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