Hi Glen,
Have you tried double within function? I use following command to display
residues within 10A from any ligand:
display within(groups,within(10,TRUE,*/2))
Note: receptor is model #1 and multiple ligands are in model 2 as frames.
Change "*/2" to your ligand selection.
----
Pozdrawiam, | Best regards,
Maciek Wójcikowski
[email protected]
2014/1/9 Glen van Ginkel <[email protected]>
> Hi all,
>
> After loading a PDB file I'm trying to restrict the view to the
> environment (surrounding residues) of a specific ligand. I'm able to
> select atoms within a given distance, but for amino acids that are
> truncated due to the distance cut-off I'd like to show the whole
> residue. Put another way, I want to display complete residues (Nucleic
> or Protein monomers, interacting heterogens and co-factors) within a
> given distance of a ligand.
>
> I've looked through much documentation and many website but I can't seem
> to find the necessary commands to do this.
>
>
> If any of you have suggestions I'd be most eager to hear from you.
>
> Kind regards,
>
> Glen
>
>
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