each of these isosurfaces is going to need its own ID. I would recommend
using DRAW rather than ISOSURFACE here.
for (var i IN {_P}) { isosurface ID @{"i"+i.atomIndex} center @i sphere
2.5}
better:
for (var i IN {_P}) { draw ID @{"d"+i.atomIndex} width 5.0 @i}
unless those need to be meshes.
another option is geosurface:
select _P
geosurface 2.5
On Wed, Jan 29, 2014 at 2:41 PM, Spinney, Richard <
rspin...@chemistry.ohio-state.edu> wrote:
> I am trying to draw a sphere around a subset of atoms in a structure and
> have tried the following command;
>
> for (var i IN [_P]) { isosurface myiso sphere 2.5} (also tried for (var i
> IN {_P}) { isosurface myiso sphere 2.5} and select *.P; for (var i IN
> {selected}) { isosurface myiso sphere 2.5}))
>
> which draws a single sphere at a point other than the selected atom type
> rather than drawing a sphere around all P. Is this a bug or am I missing
> something?
>
>
>
> Thanks, Rick
>
> --------------------------------------
>
> Dr. Richard Spinney
>
> Department of Chemistry and Biochemistry
>
> The Ohio State University
>
> 120A Celeste Laboratory
>
> 120 West 18th Ave
>
> Columbus, Ohio 43210
>
>
>
> email: rspin...@chemistry.ohio-state.edu
>
>
>
> Phone: (614) 247 - 6847
>
> Fax: (614) 292 - 1685
>
>
>
>
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