On 03/26/2014 07:31 PM, Dale Tronrud wrote:
> Hi,
>
>     I'm loading a pdb file and selecting just a subset for display.  The
> scripting commands I use are
>
> load =1QW9; display WITHIN(4.0,F,169-171:b); center 170:B:CA
>
> I find that the atoms are scaled down so that the entire molecule would
> be visible, but since I'm only displaying a small subset the image is
> very tiny.  I can, of course, mouse-wheel it up to size but this gets
> tiresome after reloading many times.  Is there a way to rescale the
> atoms so my subset fills the screen?
>
>     I've looked through the wiki, and despite learning interesting things
> about "Food Supplements For Your American Bulldog" and "Max Lean X
> Supplement" I've not come across a solution to my problem.
>
>     I'm using the version of jmol from 2014.03.22.
>
You could add "zoom 0" to your initial commands.
See the Jmol scripting documentation for more information:
http://jena3d.fli-leibniz.de/doc/jmol_scripting/index.htm#zoom

Regards,
Rolf

-- 

Rolf Huehne
Postdoc

Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI)
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