ps -- Looks like a piece of the signing system I use (the one that involves
calling a server to inserting the time stamp) failed yesterday, and the
Java versions of files dated April 8 are all broken.

Andreas, FYI, I was using http://tsa.starfieldtech.com, but am switching to
http://timestamp.globalsign.com/scripts/timestamp.dll


On Wed, Apr 9, 2014 at 3:22 AM, Angel Herráez <[email protected]> wrote:

> Bob and Xiang-Jun,
>
> That sounds VERY interesting!
> Congratulations
>
> I will need some time before I can test this at some length.
>
> Yes, avoid the ribosome. I have a small set of PDB IDs that could be
> used for testing/demo, if you need them -- tRNA, snall and large
> rRNA, hairpins, an N base bound to a small RNA (riboswitch)...
>
> By the way, although this is separate, we recently had some problem
> (while testing some Proteopedia issues) with individual nucleotides
> (GMP, ATP...) being read as "nucleic" rather than "ligand". I
> understand the rationale, but it is not ideal. That might also affect
> when you start doing fancy nucleic secondary structure rendering.
>
>
>
>
>
>
>
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-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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