Dear Angel,

thanks for your reply. These pointers are indeed very useful. The Java
version actually works, even if I discovered, with some frustration, that
the Java plugin does not work with current versions Chrome and Chromium in
Linux...

I was wondering if it is possible to load and use JSmol through
Require.JS... I am a novice of frameworks like require.js and don't know
really how to use it...

Best,
Roberto

Roberto Mosca, Ph.D.

*Interactome3D* - http://interactome3d.irbbarcelona.org

Structural Bioinformatics and Network Biology
Institute for Research in Biomedicine (IRB Barcelona)
Parc Científic de Barcelona
C/ Baldiri Reixac 10
08028 Barcelona - Spain

Email: [email protected]
Tel:   +34 93 40 39689
Web:   http://sbnb.irbbarcelona.org/people/roberto_mosca



On Fri, Sep 26, 2014 at 1:15 PM, Angel Herráez <[email protected]> wrote:

> Hola, Roberto
>
> That's going to be tricky to diagnose, I guess.
>
> I'd not give a solution or answer, but a couple of pointers:
>
> 1- Try loading JSmol in Java mode, to see if there is any difference.
> The Javascript library is the same, but the object generated has less
> javascript, so there may be a clue.
> To do so, append  "?_USE=JAVA"  to the URL
>
> http://wiki.jmol.org/index.php/Jmol_JavaScript_Object#Setting_paramete
> rs_from_the_URL
>
> 2- The list of varibles that JSmol uses is at
>
> http://wiki.jmol.org/index.php/Compatibility
>
> Good luck!
>
>
>
>
>
>
>
>
>
> ·
>  Dr. Angel Herráez
>  Biochemistry and Molecular Biology,
>  Dept. of Systems Biology, University of Alcalá
>  E-28871 Alcalá de Henares  (Madrid), Spain
>
>
>
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