There is a bug in 14.3.10_2014.11.27:

select chain=a

sometimes wrongly selects zero atoms. Unfortunately repeating the series of commands that gives this bug does not always repeat the bug. However I have seen it over and over in recent days using the Jmol application with manually issued commands. I have seen it many times with just a handful of commands with a fresh restart of the app. I have spent about an hour trying to come up with a command sequence that will give this result 100%, but to no avail. Once it happens, I have never seen it recover.

AH, I REPEATED THE EXAMPLE BELOW WITH A FRESH APP START FOUR TIMES AND IT FAILED EACH TIME, SO MAYBE IT IS A REPEATABLE EXAMPLE.


$ load =2hil
CELL ADHESION                           29-JUN-06   2HIL
STRUCTURE OF THE NEISSERIA GONORRHOEAE TYPE IV PILUS FILAMENT FROM X-
RAY CRYSTALLOGRAPHY AND ELECTRON CRYOMICROSCOPY
found biomolecule 1: A, B, C, D, E, F, G, H, I,

$ select chain=a
*1243 atoms selected*
$ select his
360 atoms selected
$ select his and chain=a
0 atoms selected
$ select chain=a
0 atoms selected
$

Sincerely, Eric
------------------------------------------------------------------------------
New Year. New Location. New Benefits. New Data Center in Ashburn, VA.
GigeNET is offering a free month of service with a new server in Ashburn.
Choose from 2 high performing configs, both with 100TB of bandwidth.
Higher redundancy.Lower latency.Increased capacity.Completely compliant.
http://p.sf.net/sfu/gigenet
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-users

Reply via email to