Hi All,
I am developing a webpage that use Jmol.
In this page user will be able to open PDB molecule and navigate through a
list of residues in a separate table.
I would like to add a functionality that allows user to see a particular
residue which he selects it in a table. For that reason, I would like to
rotate a protein in Jmol to show user a residue that he selected in a
table, i.e. to rotate protein in such a way that particular residue would
be in a center of a window at the front side of the protein.
I did not find a jmol command that can do it directly, so I am going to do
it in a two steps: first, calculate a degree that I should rotate protein
and then rotate the protein.
For a calculation of degree I need to know current coordinates of the atoms
of the selected residue. Which command I can use to get a current {x,y,z,}
coordinates of any atom of the particular residue? Under the current
coordinates I mean not the original coordinates of an atom in a PDB file,
but a current position of the atom (user can rotate the protein by a mouse
pointer).
Thanks in advance
seven32
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