I’m trying to prepare some figures for publication and I want to show hydrogen bonds between NH and O of backbone peptide bonds. If I use the command:
restrict (118,119,120,121,122,123) AND NOT (*.H???, *.1H???, *.2H???, *.3H???) wireframe 0.3 This selects the residues I want and their side chains but none of the hydrogens. The peptide bond hydrogens have names like [GLY]121:A.H #1721 whereas the sidechain hydrogens have names like [GLN120]A.2HE2 #1705 . Is there an expression that will keep the Hs I want I’ve tried the alternative of finding the atom numbers of the Hs I want to visualise and selected them, but I can only visualise them by “spacefill” - “wireframe 0.3" does nothing after selection. Googling just adds to my woes. Is there a document anywhere that explains this dreadful scripting language? In pain, David _______________________________________________________ Dr. David P. Leader, Boyd Orr Building, University of Glasgow Glasgow G12 8QQ, UK Phone: +44 (0)141 330 5905 _______________________________________________________
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