Thanks Bob - the hanging issue is certainly fixed. I'm still seeing render errorjava.lang.NullPointerException for two out of my collection of 60+ msCIFs The other one is
http://scripts.iucr.org/cgi-bin/sendcif?ck5035 NB. it renders OK if I load with FILTER "MODAVERAGE" so I can at least work round this Cheers Simon Quoting Robert Hanson <hans...@stolaf.edu>: > I don't know for sure what your problem is with dk5003, Simon. That is > working for me in this latest release at chemapps. But I did find the > mistake in Jmol that causes xk5017 to stop. It's in an infinite loop. > > http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.15_2015.06.16.zip > > Jmol.___JmolVersion="14.3.15_2015.06.16" > bug fix: msCIF reader failing for Legendre polynomials of order greater > than 4 > -- JavaScript fix for new double[m + 1][] > -- must use AU.newDouble2(m + 1); > > > > > > On Mon, Jun 15, 2015 at 4:19 AM, <si...@publcif.co.uk> wrote: > >> >> I'm afraid I'm still seeing the same problems with: >> >> http://scripts.iucr.org/cgi-bin/sendcif?xk5017 (hanging in JSmol but >> not in Java application) >> >> http://scripts.iucr.org/cgi-bin/sendcif?dk5003 (model not rendering) >> >> MB in the second example, if I remove the other models leaving just the >> superspace model, I still get nothing. >> Java console gives: ...render errorjava.lang.NullPointerException >> >> Cheers >> >> Simon >> >> >> >> >> Quoting Robert Hanson <hans...@stolaf.edu>: >> >> > I checked with Vaclav, and he agrees that the file is invalid. >> > >> > Problem #2 is with >> > >> > loop_ >> > _jana_atom_site_displace_Legendre_atom_site_label >> > _jana_atom_site_displace_Legendre_axis >> > _jana_atom_site_displace_Legendre_param_order >> > _jana_atom_site_displace_Legendre_param_coeff >> > >> > >> > that was a bug >> > >> > #3 crashed Jmol in the situation where only one of two models in a CIF >> file >> > had displacive modulation, and Jmol was failing on that. >> > >> > see http://chemapps.stolaf.edu/jmol/zip/jmol-14.3.15_2015.06.14.zip >> > >> > >> > >> > Jmol.___JmolVersion="14.3.15_2015.06.12b" >> > >> > bug fix: msCIF reading with two models, and only one has displacement >> > modulation causes "render error" crash >> > bug fix: msCIF reader failing for Legendre polynomials of order greater >> > than 4 >> > >> > >> > ?See http://chemapps.stolaf.edu/jmol/zip/ >> > >> >> >> >> >> ------------------------------------------------------------------------------ >> _______________________________________________ >> Jmol-users mailing list >> Jmol-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> > > > > -- > Robert M. Hanson > Larson-Anderson Professor of Chemistry > Chair, Department of Chemistry > St. Olaf College > Northfield, MN > http://www.stolaf.edu/people/hansonr > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > ------------------------------------------------------------------------------ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
