On 11/20/2015 12:40 PM, GABRIEL PONS IRAZAZABAL wrote: > Eric/Bob, > Its a Little weird that the rotation for the same molecule with JSmol (no > java) is excellent using proteopedia but very slow using the interface > firstglance. Even with the popup tool and extending the molecule through the > whole screen the rotation is excellent. > In my opinion (I am using chrome) this is a not a trivial problem, especially > using big proteins > Any explanation? There are two differences I noticed which affect rotation speed for example entry 1EMA:
1) In proteopedia the 'platformspeed' setting is "5" and in FirstGlance it is "10". Setting it to "5" also increases rotation speed for me in FirstGlance, especially with high quality rendering. 2) In FirstGlance there are additionally rendered two large "baskets" for missing residues. These are actually isosurfaces and significantly slow down rotation in JSmol/HTML5. If I switch them off in the console with the command 'isosurface * off' rotation speed increases for me. Regards, Rolf -- Rolf Huehne Postdoc Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) Beutenbergstrasse 11 07745 Jena, Germany Phone: +49 3641 65 6205 Fax: +49 3641 65 6210 E-Mail: rhue...@leibniz-fli.de Website: http://www.leibniz-fli.de Scientific Director: Prof. Dr. K. Lenhard Rudolph Head of Administration: Dr. Daniele Barthel Chairman of Board of Trustees: Burkhard Zinner VAT No: DE 153 925 464 Register of Associations: No. 230296, Amtsgericht Jena Tax Number: 162/141/08228 ------------------------------------------------------------------------------ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
