OK, that's useful information. Please see if you have the same problem with synchronization here:
http://chemapps.stolaf.edu/jmol/jsmol/sync4.htm (Oh, except the St. Olaf web server just went down) Maybe try another site with that. My guess is that those pages are not loading smoothly. You can help that along using Jmol.setAppletSync = function(applets, commands, isJmolJSV) { Jmol._syncedApplets = applets; // an array of appletIDs Jmol._syncedCommands = commands; // an array of commands; one or more may be null Jmol._syncedReady = {}; Jmol._isJmolJSVSync = isJmolJSV; } Issuing this ahead of time guarantees that they will load in the exact order specified in the arrays, one after the other, with no commands issued until all are loaded. Something like this: Jmol.setAppletSync(["jmolApplet1", "jmolApplet2"], ["", ""]) On Wed, Dec 30, 2015 at 3:13 PM, Spinney, Richard < rspin...@chemistry.ohio-state.edu> wrote: > > > > I also have a number of pages that used “ESP mapped total electron density > surfaces. They are JVXL files (version 2.2) generated using the Jmol > application. The isosurfaces appear but the color mapping is missing, they > appear in a single chromic orange color. > > please send me that file so I can see what you are talking about. > > > I also noticed that the “lcaocartoon scale 1.0 CAP unitcell "cpk"” command to > created “packed” unit cells seems to have a bug. Atoms that are half in the > unit cell have a flat surface on the cell wall, but atoms at the corner of > the unit cell are missing 2 or 3 of the flat surfaces along the unit cell > walls. > > > found it -- those are the atoms on edges, which require two cuts. That was tricky! > Thanks, Rick > > > > Dr. Richard Spinney > > Department of Chemistry & Biochemistry > > The Ohio State University > > 120A Celeste Laboratory > > 120 West 18th Ave > > Columbus, Ohio 43210 > > > > Email: rspin...@chemistry.ohio-state.edu > > Phone: (614) 247 - 6847 > > Fax: (614) 292 - 1685 > > > > > ------------------------------------------------------------------------------ > > _______________________________________________ > Jmol-users mailing list > Jmol-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-users > > -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Department of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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