Ashok,
The script is probably running before Jmol has finished loading.

Try calling the match function from within a Jmol script; this will not run 
before Jmol is ready

Alternatively, use Info.readyFunction 
http://wiki.jmol.org/index.php/Jmol_JavaScript_Object/Info#Startup_period


·
 Dr. Angel Herráez
 Biochemistry and Molecular Biology,
 Dept. of Systems Biology, University of Alcalá
 E-28871 Alcalá de Henares  (Madrid), Spain


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