Hello Jyoti
It's hard to say without seeing the files.
1. Which file format is your data saved to?
2. In some file formats, vibrations are stored in different models ("frames")
in
the file. By default Jmol displays only the first frame. Try advancing to other
frames, either with the buttons in the Jmol application top toolbar or with
this
command:
frame next
and then try the vibrations
Or, if you need more unti cells, find the appropriate commands in JmolScript
-- but I doubt that will expand vibrations to the added cells.
3. Best is to share your file or a URL with it, so we can see and test
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