Jmol is unable to extract and render Sheet information from the new PDBe
generated cif files, with chain IDs in sheet records are specified as A-2, A-3
, see http://www.ebi.ac.uk/pdbe/coordinates/1stp/assembly?id=1
On 8 Jul 2016, at 5:09 PM, Herráez Sánchez Ángel
<angel.herr...@uah.es<mailto:angel.herr...@uah.es>> wrote:
Thank you, Bob
> I recommend that Proteopedia not remove the helix/sheet records.
Of course. That is feasible with the pdb files that were formerly used, and we
had thought of it (me and Jaime).
The problem now is that Protepedia is now swiatching to using a copy of the
"assembly" mmCIF file from PDBe, and for those files they seem to be using a
different set of records / fields / format than for regular mmCIF files. That
is making diagnosis more difficult. There might be a need to revise the Jmol
reader for these files, or an adjustment on the part of PDBe of which fields
they are including. We are after that. Thank you for your feedback.
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