I've been encountering errors with packages in parallel, even though everything
is happening on one machine (julia -p 4 or -p 3 under ESS). This isn't
necessarily the same issue, but it seems suggestive it's arising at the same
time.
Originally I think the packages/cache were a bit out of date, and when I ran in
parallel things went wrong and rebuilt everywhere. If they were all rebuilding
in the same spot, as they seemed to, it's easy to imagine that would cause
problems. I also had a single CPU copy of julia running at the same time
(idle) throughout.
After that I started up a single cpu version, did a Pkg.update(), and ran my
code. Everything seemed OK.
However, I then ran a parallel julia, and continued to get errors. The
included code is all in a module and connect to a Postgresql DB to get some
data.
Here are excerpts from the sessions:
<first time>
| | | | | | |/ _' | |
| | |_| | | | (_| | | Version 0.4.6-pre+28 (2016-04-22 00:59 UTC)
_/ |\__'_|_|_|\__'_| | Commit 022917e (44 days old release-0.4)
|__/ | x86_64-linux-gnu
WARNING: Terminal not fully functional
julia>
julia> nprocs()
5
julia> now()
2016-06-05T00:04:52 # Pacific time US
julia> @everywhere include("trouble.jl")
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Debug.ji for
module Debug.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/PDMats.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/PDMats.ji
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/PDMats.ji
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/PDMats.ji
WARNING: Module PDMats uuid did not match cache file
This is likely because module PDMats does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module PDMats uuid did not match cache file
This is likely because module PDMats does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsFuns.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsFuns.ji
WARNING: Module PDMats uuid did not match cache file
This is likely because module PDMats does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsFuns.ji
WARNING: Module PDMats uuid did not match cache file
This is likely because module PDMats does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsFuns.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ArrayViews.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ArrayViews.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ArrayViews.ji
WARNING: replacing module Debug
WARNING: replacing module Debug
WARNING: replacing module Debug
WARNING: replacing module Debug
WARNING: Module ArrayViews uuid did not match cache file
This is likely because module ArrayViews does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsBase.ji
WARNING: Module ArrayViews uuid did not match cache file
This is likely because module ArrayViews does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsBase.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ArrayViews.ji
WARNING: Module ArrayViews uuid did not match cache file
This is likely because module ArrayViews does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsBase.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Distributions.ji
for module Distributions.
WARNING: Module ArrayViews uuid did not match cache file
This is likely because module ArrayViews does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/StatsBase.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/PDMats.ji for
module PDMats.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/SortingAlgorithms.ji
WARNING: Module SortingAlgorithms uuid did not match cache file
This is likely because module SortingAlgorithms does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/SortingAlgorithms.ji
WARNING: Module SortingAlgorithms uuid did not match cache file
This is likely because module SortingAlgorithms does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/SortingAlgorithms.ji
WARNING: Module SortingAlgorithms uuid did not match cache file
This is likely because module SortingAlgorithms does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/SortingAlgorithms.ji
WARNING: Module SortingAlgorithms uuid did not match cache file
This is likely because module SortingAlgorithms does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DataArrays.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/StatsFuns.ji for
module StatsFuns.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/GZip.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Docile.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/GZip.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Docile.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/GZip.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Docile.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/GZip.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Docile.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/ArrayViews.ji
for module ArrayViews.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/JSON.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ImmutableArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/JSON.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/StatsBase.ji for
module StatsBase.
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/JSON.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ImmutableArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/JSON.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ImmutableArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ImmutableArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Codecs.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedPointNumbers.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Colors.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ColorTypes.ji
WARNING: both DataArrays and StatsBase export "autocor"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "inverse_rle"; uses of it in
module DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "rle"; uses of it in module
DataFrames must be qualified
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Codecs.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedPointNumbers.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Codecs.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedPointNumbers.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Colors.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ColorTypes.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Codecs.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedPointNumbers.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Colors.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ColorTypes.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Colors.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/ColorTypes.ji
WARNING: both DataArrays and StatsBase export "autocor"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "inverse_rle"; uses of it in
module DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "rle"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "autocor"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "inverse_rle"; uses of it in
module DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "rle"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "autocor"; uses of it in module
DataFrames must be qualified
WARNING: both DataArrays and StatsBase export "inverse_rle"; uses of it in
module DataFrames must be qualified
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Iterators.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Compose.ji
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: node state is inconsistent: node 2 failed to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: node state is inconsistent: node 3 failed to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: node state is inconsistent: node 4 failed to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Iterators.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Iterators.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Iterators.ji
WARNING: node state is inconsistent: node 5 failed to load cache from
/home/ross/.julia/lib/v0.4/Distributions.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Compose.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Compose.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Compose.ji
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module FastGaussQuadrature
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Cairo.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Graphics.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/DataFrames.ji
for module DataFrames.
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Cairo.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Cairo.ji
WARNING: Module FixedPointNumbers uuid did not match cache file
This is likely because module FixedPointNumbers does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Cairo.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: both DataArrays and StatsBase export "rle"; uses of it in module
DataFrames must be qualified
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Graphics.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Graphics.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Graphics.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/DataArrays.ji
for module DataArrays.
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Showoff.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Showoff.ji
WARNING: Module Iterators uuid did not match cache file
This is likely because module Iterators does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Showoff.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Hexagons.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Hexagons.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Hexagons.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Contour.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedSizeArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Contour.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Contour.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedSizeArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/FixedSizeArrays.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Loess.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Loess.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Loess.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/WoodburyMatrices.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/WoodburyMatrices.ji
WARNING: Module WoodburyMatrices uuid did not match cache file
This is likely because module WoodburyMatrices does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/KernelDensity.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Calculus.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/WoodburyMatrices.ji
WARNING: Module WoodburyMatrices uuid did not match cache file
This is likely because module WoodburyMatrices does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/KernelDensity.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Calculus.ji
WARNING: Module WoodburyMatrices uuid did not match cache file
This is likely because module WoodburyMatrices does not support
precompilation but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/KernelDensity.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Calculus.ji
WARNING: Module Calculus uuid did not match cache file
This is likely because module Calculus does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DualNumbers.ji
WARNING: Module Calculus uuid did not match cache file
This is likely because module Calculus does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DualNumbers.ji
WARNING: Module Calculus uuid did not match cache file
This is likely because module Calculus does not support precompilation but
is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/DualNumbers.ji
WARNING: Module DualNumbers uuid did not match cache file
This is likely because module DualNumbers does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Optim.ji
WARNING: Module DualNumbers uuid did not match cache file
This is likely because module DualNumbers does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Optim.ji
WARNING: Module DualNumbers uuid did not match cache file
This is likely because module DualNumbers does not support precompilation
but is imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Optim.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Grid.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Grid.ji
WARNING: Module Compat uuid did not match cache file
This is likely because module Compat does not support precompilation but is
imported by a module that does.
WARNING: deserialization checks failed while attempting to load cache from
/home/ross/.julia/lib/v0.4/Grid.ji
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/GZip.ji for
module GZip.
INFO: Recompiling stale cache file
/home/ross/.julia/lib/v0.4/SortingAlgorithms.ji for module SortingAlgorithms.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Docile.ji for
module Docile.
WARNING: Module Docile uuid did not match cache file
This is likely because module Docile does not support precompilation but is
imported by a module that does.
WARNING: Module Docile uuid did not match cache file
This is likely because module Docile does not support precompilation but is
imported by a module that does.
WARNING: Module Docile uuid did not match cache file
This is likely because module Docile does not support precompilation but is
imported by a module that does.
WARNING: node state is inconsistent: node 2 failed to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: Module Docile uuid did not match cache file
This is likely because module Docile does not support precompilation but is
imported by a module that does.
WARNING: node state is inconsistent: node 3 failed to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: node state is inconsistent: node 4 failed to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: node state is inconsistent: node 5 failed to load cache from
/home/ross/.julia/lib/v0.4/DataFrames.ji
WARNING: replacing module DBI
WARNING: replacing module DBI
WARNING: replacing module DBI
WARNING: replacing module DBI
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/JSON.ji for
module JSON.
WARNING: replacing module PostgreSQL
WARNING: replacing module PostgreSQL
WARNING: replacing module PostgreSQL
WARNING: replacing module PostgreSQL
INFO: Recompiling stale cache file
/home/ross/.julia/lib/v0.4/ImmutableArrays.ji for module ImmutableArrays.
WARNING: replacing module ImmutableArrays
WARNING: replacing module ImmutableArrays
WARNING: replacing module ImmutableArrays
WARNING: replacing module ImmutableArrays
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Gadfly.ji for
module Gadfly.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Codecs.ji for
module Codecs.
INFO: Recompiling stale cache file
/home/ross/.julia/lib/v0.4/FixedPointNumbers.ji for module FixedPointNumbers.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Colors.ji for
module Colors.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/ColorTypes.ji
for module ColorTypes.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Iterators.ji for
module Iterators.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Compose.ji for
module Compose.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Cairo.ji for
module Cairo.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Graphics.ji for
module Graphics.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Showoff.ji for
module Showoff.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Hexagons.ji for
module Hexagons.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Contour.ji for
module Contour.
INFO: Recompiling stale cache file
/home/ross/.julia/lib/v0.4/FixedSizeArrays.ji for module FixedSizeArrays.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Loess.ji for
module Loess.
INFO: Recompiling stale cache file
/home/ross/.julia/lib/v0.4/WoodburyMatrices.ji for module WoodburyMatrices.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/KernelDensity.ji
for module KernelDensity.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Calculus.ji for
module Calculus.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/DualNumbers.ji
for module DualNumbers.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Optim.ji for
module Optim.
INFO: Recompiling stale cache file /home/ross/.julia/lib/v0.4/Grid.ji for
module Grid.
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: node state is inconsistent: node 2 failed to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: node state is inconsistent: node 3 failed to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: node state is inconsistent: node 4 failed to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
WARNING: Module StatsFuns uuid did not match cache file
This is likely because module StatsFuns does not support precompilation but
is imported by a module that does.
WARNING: node state is inconsistent: node 5 failed to load cache from
/home/ross/.julia/lib/v0.4/Gadfly.ji
ERROR: On worker 5:
LoadError: LoadError: LoadError: LoadError: UndefVarError: CairoSurface not
defined
in include_string at loading.jl:282
in include_from_node1 at ./loading.jl:323
in include_string at loading.jl:282
in include_from_node1 at ./loading.jl:323
in require at ./loading.jl:259
in include_string at loading.jl:282
in include_from_node1 at ./loading.jl:323
in require at ./loading.jl:259
in include_string at loading.jl:282
in include_from_node1 at ./loading.jl:323
in eval at ./sysimg.jl:14
in anonymous at multi.jl:1394
in anonymous at multi.jl:923
in run_work_thunk at multi.jl:661
[inlined code] from multi.jl:923
in anonymous at task.jl:63
while loading /home/ross/.julia/v0.4/Compose/src/cairo_backends.jl, in
expression starting on line 45
while loading /home/ross/.julia/v0.4/Compose/src/Compose.jl, in expression
starting on line 17
while loading /home/ross/.julia/v0.4/Gadfly/src/Gadfly.jl, in expression
starting on line 9
while loading /home/ross/PCORI/trouble.jl, in expression starting on line 10
in remotecall_fetch at multi.jl:747
in remotecall_fetch at multi.jl:750
in anonymous at multi.jl:1396
in sync_end at ./task.jl:413
in anonymous at multi.jl:1405
julia> include("/home/ross/PCORI/trouble.jl")
WARNING: replacing module RB
RB
julia> @everywhere include("trouble.jl")
WARNING: replacing module RB
WARNING: replacing module RB
WARNING: replacing module RB
WARNING: replacing module RB
WARNING: replacing module RB
WARNING: could not import Gadfly.plot into RB
</first time>
And after the cleanup with one CPU:
<later>
julia> nprocs()
4
julia> @everywhere include("trouble.jl")
WARNING: replacing module Debug
WARNING: replacing module Debug
WARNING: replacing module Debug
WARNING: replacing module Distributions
WARNING: replacing module Distributions
WARNING: replacing module Distributions
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module FastGaussQuadrature
WARNING: replacing module DataFrames
WARNING: Method definition dump(Base.IO, DataArrays.AbstractDataArray{T<:Any,
1}, Int64, Any) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358.
WARNING: Method definition vcat(Array{Void, 1}) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677.
WARNING: Method definition describe(AbstractArray) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406.
WARNING: Method definition describe(Any, AbstractArray{#T<:Number, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408.
WARNING: Method definition describe(Any, AbstractArray{#T<:Any, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425.
WARNING: replacing module DataFrames
WARNING: Method definition dump(Base.IO, DataArrays.AbstractDataArray{T<:Any,
1}, Int64, Any) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358.
WARNING: Method definition vcat(Array{Void, 1}) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677.
WARNING: Method definition describe(AbstractArray) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406.
WARNING: Method definition describe(Any, AbstractArray{#T<:Number, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408.
WARNING: Method definition describe(Any, AbstractArray{#T<:Any, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425.
WARNING: replacing module DataFrames
WARNING: Method definition dump(Base.IO, DataArrays.AbstractDataArray{T<:Any,
1}, Int64, Any) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:358.
WARNING: Method definition vcat(Array{Void, 1}) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:677.
WARNING: Method definition describe(AbstractArray) in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:406.
WARNING: Method definition describe(Any, AbstractArray{#T<:Number, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:408.
WARNING: Method definition describe(Any, AbstractArray{#T<:Any, N<:Any}) in
module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425
overwritten in module DataFrames at
/home/ross/.julia/v0.4/DataFrames/src/abstractdataframe/abstractdataframe.jl:425.
WARNING: replacing module DBI
WARNING: replacing module DBI
WARNING: replacing module DBI
WARNING: replacing module PostgreSQL
WARNING: replacing module PostgreSQL
WARNING: replacing module PostgreSQL
WARNING: replacing module ImmutableArrays
WARNING: replacing module ImmutableArrays
WARNING: replacing module ImmutableArrays
WARNING: replacing module Gadfly
WARNING: New definition
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57
is ambiguous with:
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57.
To fix, define
chain()
before the new definition.
WARNING: replacing module Gadfly
WARNING: New definition
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57
is ambiguous with:
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57.
To fix, define
chain()
before the new definition.
WARNING: replacing module Gadfly
WARNING: New definition
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57
is ambiguous with:
chain(Gadfly.Data...) at /home/ross/.julia/v0.4/Gadfly/src/data.jl:57.
To fix, define
chain()
before the new definition.
ERROR: On worker 2:
LoadError: MethodError: `prepare` has no method matching
prepare(::PostgreSQL.PostgresDatabaseHandle, ::ASCIIString)
Closest candidates are:
prepare(::PostgreSQL.PostgresDatabaseHandle, ::AbstractString)
prepare(::DBI.DatabaseHandle, ::AbstractString)
in include_string at loading.jl:282
in include_from_node1 at ./loading.jl:323
in eval at ./sysimg.jl:14
in anonymous at multi.jl:1394
in anonymous at multi.jl:923
in run_work_thunk at multi.jl:661
[inlined code] from multi.jl:923
in anonymous at task.jl:63
while loading /home/ross/PCORI/trouble.jl, in expression starting on line 15
in remotecall_fetch at multi.jl:747
in remotecall_fetch at multi.jl:750
in anonymous at multi.jl:1396
in sync_end at ./task.jl:413
in anonymous at multi.jl:1405
</last>
From: [email protected] [[email protected]] on behalf of
Ethan Anderes [[email protected]]
Sent: Saturday, June 04, 2016 7:57 AM
To: julia-users
Subject: Re: [julia-users] errors using packages in parallel
Just synchronized the julia versions to the exact commit number (using `git
checkout 430601c` on my laptop). The problem still persists. I wonder if I
should just open an issue on github and move the conversation there. I just
wanted to make sure I wasn't making
an obvious mistake with the syntax since this is the first time I've tried to
use the ssh tunnel thing.
Ethan
