Henh,
I'm sorry, I'm not sure what's going on there. It's possible
that this is a bug in the build system or that I'm wrong and you do in fact
need gcc 4.7 when building with intel. I thought I'd done a purely intel
build before but turns out I used the intel fortran compiler and gcc so I
can't confirm that pure intel works.
On Tuesday, June 21, 2016 at 2:50:47 PM UTC-7, AB wrote:
>
> Thanks again for your comment.
>
> I followed those instructions, but I am not sure I did everything right
> because it seems like it still is looking for GCC during the install.
> 'make' terminated with this set of errors. (On the 9th line it appears to
> be looking for gcc.)
>
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether icc accepts -g... yes
> checking for icc option to accept ISO C89... none needed
> checking whether we are using the GNU C++ compiler... yes
> checking whether icpc accepts -g... yes
> checking how to run the C preprocessor... icc -E
> checking whether GCC or Clang is our host compiler... gcc
> checking build system type... x86_64-redhat-linux-gnu
> checking host system type... x86_64-redhat-linux-gnu
> checking target system type... x86_64-redhat-linux-gnu
> checking type of operating system we're going to host on... Linux
> checking type of operating system we're going to target... Linux
> checking target architecture... x86_64
> checking whether GCC is new enough... no
> configure: error:
> The selected GCC C++ compiler is not new enough to build LLVM. Please
> upgrade
> to GCC 4.7. You may pass --disable-compiler-version-checks to configure to
> bypass these sanity checks.
> make[1]: *** [build/llvm-3.7.1/build_Release/config.status] Error 1
> make: *** [julia-deps] Error 2
>
> At other points in the install it seemed like it was using ICC, not GCC.
> For example, the second to last line here:
>
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking whether make supports nested variables... yes
> checking for style of include used by make... GNU
> checking for gcc... icc
> checking whether the C compiler works... yes
>
> The Make.user file contains the lines:
>
> USEICC = 1
> USEIFC = 1
> USE_INTEL_MKL = 1
> USE_INTEL_MKL_FFT = 1
> USE_INTEL_LIBM = 1
>
>
> I also ran this:
>
> source /opt/apps/intel/15/composer_xe_2015.2.164/bin/compilervars.sh
> intel64
>
>
> This was from a fresh clone. Is there something else I should try?
>
> Thanks again!
>
> AB
>
>
> On Tuesday, June 21, 2016 at 4:10:48 PM UTC-5, Patrick Belliveau wrote:
>>
>> Yep, using that version of gcc definitely won't work. However, if you're
>> using the intel compilers then you don't need gcc. If you haven't seen it,
>> instructions for using the intel compilers are here
>> <https://github.com/JuliaLang/julia#intel-compilers-and-math-kernel-library-mkl>
>> .
>>
>> Cheers, Patrick
>>
>> On Tuesday, June 21, 2016 at 1:57:52 PM UTC-7, AB wrote:
>>>
>>> Thanks for the feedback. I have been told that the version of gcc
>>> available on this system is a bit old.
>>>
>>> gcc --version returns:
>>>
>>> gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-16)
>>>
>>> I think version 4.7 is required for julia. The administrators of the
>>> cluster would like me to use the Intel compilers, which I am trying to
>>> figure out, but I will ask if I can update gcc too.
>>>
>>> Thanks again!
>>>
>>> AB
>>>
>>>
>>>
>>> On Tuesday, June 21, 2016 at 12:01:21 PM UTC-5, Patrick Belliveau wrote:
>>>>
>>>> It's not clear to me what's going on here but as a first attempt at
>>>> troubleshooting, are you sure that you have up to date installations of
>>>> all
>>>> the required build tools and external libraries required to build Julia
>>>> from source? In particular, you should check that make is using recent
>>>> enough versions of gcc and g++. See the Julia github page for required
>>>> versions. Even if you have a satisfactory version of gcc installed on your
>>>> system, make may be using an older default version if you haven't
>>>> specified
>>>> your c compiler in Make.user. You can do that by adding the following two
>>>> lines to Make.user:
>>>> CC=/path_to_gcc_binary
>>>> CXX=/path_to_g++_binary
>>>>
>>>>
>>>> On Monday, June 20, 2016 at 5:26:19 PM UTC-7, AB wrote:
>>>>>
>>>>> Sorry! I thought that was the relevant part. I just ran make again.
>>>>> It returned this:
>>>>>
>>>>> In file included from src/s_fmax.c:32:
>>>>> src/fpmath.h:105: error: duplicate member ‘manl’
>>>>> In file included from src/math_private.h:26,
>>>>> from src/s_fmax.c:33:
>>>>> src/math_private_openbsd.h:54: error: conflicting types for
>>>>> ‘ieee_quad_shape_type’
>>>>> src/math_private_openbsd.h:35: note: previous declaration of
>>>>> ‘ieee_quad_shape_type’ was here
>>>>> src/math_private_openbsd.h:141: error: conflicting types for
>>>>> ‘ieee_extended_shape_type’
>>>>> src/math_private_openbsd.h:123: note: previous declaration of
>>>>> ‘ieee_extended_shape_type’ was here
>>>>> In file included from src/s_fmax.c:33:
>>>>> src/math_private.h:78: error: conflicting types for
>>>>> ‘ieee_double_shape_type’
>>>>> src/math_private.h:60: note: previous declaration of
>>>>> ‘ieee_double_shape_type’ was here
>>>>> make[2]: *** [src/s_fmax.c.o] Error 1
>>>>> make[1]: ***
>>>>> [build/openlibm-e2fc5dd2f86f1e1dc47e8fa153b6a7b776d53ab5/libopenlibm.so]
>>>>> Error 2
>>>>> make: *** [julia-deps] Error 2
>>>>>
>>>>> On Monday, June 20, 2016 at 7:05:38 PM UTC-5, Yichao Yu wrote:
>>>>>>
>>>>>> On Mon, Jun 20, 2016 at 7:50 PM, AB <[email protected]> wrote:
>>>>>> > Hello -
>>>>>> >
>>>>>> > I'm trying to install Julia on a machine at my university.
>>>>>> >
>>>>>> > When I run "make" the process terminates with the following errors:
>>>>>> >
>>>>>> > make[2]: *** [src/s_fmax.c.o] Error 1
>>>>>> > make[1]: ***
>>>>>> >
>>>>>> [build/openlibm-e2fc5dd2f86f1e1dc47e8fa153b6a7b776d53ab5/libopenlibm.so]
>>>>>> > Error 2
>>>>>> > make: *** [julia-deps] Error 2
>>>>>>
>>>>>> FWIW, you need to copy in the actual error for anyone to help. The
>>>>>> output you pasted is merely `make` complaining that something when
>>>>>> wrong, but not the compile command that actually went wrong.
>>>>>>
>>>>>> >
>>>>>> > Is this a problem with a dependency?
>>>>>> >
>>>>>> > The version information of the machine is:
>>>>>> >
>>>>>> >
>>>>>> LSB_VERSION=base-4.0-amd64:base-4.0-noarch:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
>>>>>>
>>>>>>
>>>>>> >
>>>>>> > and:
>>>>>> >
>>>>>> > Linux login2.stampede.tacc.utexas.edu 2.6.32-431.17.1.el6.x86_64
>>>>>> #1 SMP Wed
>>>>>> > May 7 23:32:49 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux
>>>>>> >
>>>>>> > I appreciate any help!
>>>>>> >
>>>>>> > Thanks,
>>>>>> >
>>>>>> > ABB
>>>>>>
>>>>>
