Hi,
As was of an update. I updated docker a day or so ago. Now I get a
different error message and I do not get offered the choice of a url. Maybe
a proxy issue. For ease, the new error is included immendiately below, the
full powershell commands and terminal output are below that.
---------------------------
PS C:\Users\MCLEAJO685> docker run -it --rm -p 8888:8888
miykael/nipype_tutorial jupyter notebook
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error response
from daemon: driver failed programming external connectivity on endpoint
nervous_swirles
(db2cf37428d0accb29f78ae030f0ed2628fe641adc4954d82269fdc26f3d4924): Error
starting userland proxy: mkdir /port/tcp:0.0.0.0:8888:tcp:172.17.0.2:8888:
input/output error.
----------------------
PS C:\Users\MCLEAJO685> docker run hello-world
Hello from Docker!
This message shows that your installation appears to be working correctly.
To generate this message, Docker took the following steps:
1. The Docker client contacted the Docker daemon.
2. The Docker daemon pulled the "hello-world" image from the Docker Hub.
(amd64)
3. The Docker daemon created a new container from that image which runs the
executable that produces the output you are currently reading.
4. The Docker daemon streamed that output to the Docker client, which sent
it
to your terminal.
To try something more ambitious, you can run an Ubuntu container with:
$ docker run -it ubuntu bash
Share images, automate workflows, and more with a free Docker ID:
https://hub.docker.com/
For more examples and ideas, visit:
https://docs.docker.com/engine/userguide/
PS C:\Users\MCLEAJO685> docker pull miykael/nipype_tutorial:latest
latest: Pulling from miykael/nipype_tutorial
Digest:
sha256:47b95501a67f115fd6ee6246c855cf15db0523908c8bf55f80e18db8b27b7986
Status: Image is up to date for miykael/nipype_tutorial:latest
PS C:\Users\MCLEAJO685> docker images
REPOSITORY TAG IMAGE ID
CREATED SIZE
ubuntu latest 16508e5c265d 7 days
ago 84.1MB
miykael/nipype_tutorial latest 00bcf07bfcbc 7 days
ago 8.49GB
nginx latest c82521676580 5 weeks
ago 109MB
hello-world latest 2cb0d9787c4d 7 weeks
ago 1.85kB
docker4w/nsenter-dockerd latest cae870735e91 10
months ago 187kB
PS C:\Users\MCLEAJO685> docker run -it --rm -p 8888:8888
miykael/nipype_tutorial jupyter notebook
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error response
from daemon: driver failed programming external connectivity on endpoint
nervous_swirles
(db2cf37428d0accb29f78ae030f0ed2628fe641adc4954d82269fdc26f3d4924): Error
starting userland proxy: mkdir /port/tcp:0.0.0.0:8888:tcp:172.17.0.2:8888:
input/output error.
PS C:\Users\MCLEAJO685> docker run -it --name repo2docker -p 8888:8888
vanessa/repo2docker-jupyterlab jupyter lab --ip 0
.0.0.0
Unable to find image 'vanessa/repo2docker-jupyterlab:latest' locally
latest: Pulling from vanessa/repo2docker-jupyterlab
4ccdce43d1e0: Pull complete
c95f13c88d92: Pull complete
82656eee95ad: Pull complete
78ff727be57a: Pull complete
448bb314afa5: Pull complete
9d5385822d13: Pull complete
e8f408ef0128: Pull complete
63314e962953: Pull complete
2867b08a103c: Pull complete
065088584bae: Pull complete
7ca732810287: Pull complete
bf42a5848b89: Pull complete
9e1bf29de72e: Pull complete
620b0b10e90f: Pull complete
a3251e53fb06: Pull complete
ab7c93f12aee: Pull complete
6fb28c5245d1: Pull complete
8a0a536069f3: Pull complete
cbe359404675: Pull complete
a21061bee9b4: Pull complete
Digest:
sha256:bc187c99851402d6980bc88413140e347383e8175db7324728d16542b898882a
Status: Downloaded newer image for vanessa/repo2docker-jupyterlab:latest
C:\Program Files\Docker\Docker\Resources\bin\docker.exe: Error response
from daemon: driver failed programming external connectivity on endpoint
repo2docker
(d465975798ad34c94ec863f7712afba995d4a7dd99996dbf74bf2a329cf38f18): Error
starting userland proxy: mkdir /port/tcp:0.0.0.0:8888:tcp:172.17.0.2:8888:
input/output error.
PS C:\Users\MCLEAJO685>
On Tuesday, 28 August 2018 13:18:51 UTC+1, John McLean wrote:
>
> Thanks for the suggestion Luciano,
>
> I tried:
>
> docker run -it --rm -p 8888:8888 miykael/nipype_tutorial jupyter notebook
> --NotebookApp.ip=0.0.0.0 --NotebookApp.port=8888
>
>
> But the outcome is the same, i'm stuck with the jupyter token/password page
> and entering token doesn't work.
>
> Best wishes
>
> John
>
>
> On Tue, Aug 28, 2018 at 12:54 PM Luciano Resende <[email protected]>
> wrote:
>
>> This might be due to Notebook being binded to localhost inside the
>> docker....
>>
>> Try adding the following parameters to your start command :
>>
>> —NotebookApp.ip=0.0.0.0
>> —NoteboopApp.port=8888
>>
>> Hope this helps...
>>
>> On Tue, Aug 28, 2018 at 03:28 John McLean <[email protected]> wrote:
>>
>>> Hi,
>>>
>>> I was following this tutorial (
>>> https://miykael.github.io/nipype_tutorial/notebooks/introduction_docker.html)
>>>
>>> to try and run jupyter notebooks from within a docker container. My docker
>>> installation and image pull were successful. I can also run the container
>>> image to start with bash or ipython. However, on starting the container
>>> with jupyter notebook, I can't get past the token/password screen on my
>>> browser.
>>>
>>> Here is the output from powershell on my host PC (running windows 10 64
>>> bit). My version of docker is 18.06 as so is up to date as of today 28/8/18.
>>>
>>> Running the command:
>>>
>>> docker run -it --rm -p 8888:8888 miykael/nipype_tutorial jupyter notebook
>>>
>>> The output is as follows:
>>>
>>>
>>> [I 10:25:05.104 NotebookApp] [nb_conda_kernels] enabled, 2 kernels found
>>> [I 10:25:05.111 NotebookApp] Writing notebook server cookie secret to
>>> /home/neuro/.local/share/jupyter/runtime/notebook_cookie_secret
>>> [I 10:25:05.297 NotebookApp] [jupyter_nbextensions_configurator] enabled
>>> 0.4.0
>>> [I 10:25:05.324 NotebookApp] JupyterLab extension loaded from
>>> /opt/miniconda-latest/envs/neuro/lib/python3.6/site-packages/jupyterlab
>>> [I 10:25:05.324 NotebookApp] JupyterLab application directory is
>>> /opt/miniconda-latest/envs/neuro/share/jupyter/lab
>>> [I 10:25:05.495 NotebookApp] [nb_conda] enabled
>>> [I 10:25:05.495 NotebookApp] Serving notebooks from local directory:
>>> /home/neuro/nipype_tutorial
>>> [I 10:25:05.496 NotebookApp] The Jupyter Notebook is running at:
>>> [I 10:25:05.496 NotebookApp] http://(2bb4cef2b045 or
>>> 127.0.0.1):8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>> [I 10:25:05.496 NotebookApp] Use Control-C to stop this server and shut
>>> down all kernels (twice to skip confirmation).
>>> [W 10:25:05.497 NotebookApp] No web browser found: could not locate
>>> runnable browser.
>>> [C 10:25:05.497 NotebookApp]
>>>
>>> Copy/paste this URL into your browser when you connect for the first
>>> time,
>>> to login with a token:
>>> http://(2bb4cef2b045 or
>>> 127.0.0.1):8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>>
>>> On copying the URL to the browser and adjusting to try different
>>> options, have tried:
>>>
>>>
>>> http://127.0.0.1:8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>>
>>> http://localhost:8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>>
>>> http://0.0.0.0:8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>>
>>> http://'mydockerNATip':8888/?token=a0d6863f5b451c7f763d4d4e20bc7e7c3bd4cd2d3b36e24f
>>>
>>> All of these either bring up the jupyter token/password page or fail. I
>>> tried logging into the docker with bash to set a password as per the
>>> jypyter guide, but this this didn't help.
>>>
>>> Does anyone have an idea where I am going wrong? Any help appreciated. I
>>> also have jupyter installed on the host machine and that has been working
>>> fine.
>>>
>>> Thanks
>>>
>>> John
>>>
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