Hi,

Do not change the module with the module editor at all.
Select the module in pcbnew, rigth-click and apply Flip. This command moves 
the module from bottom to top layer (and vice versa).

Pedro.

> I'm trying to create a small PCB with some through-hole components on
> the component layer, and two SMD's on the copper layer. I am able to
> change the SMD's to have their solder pads on the copper layer (in the
> module editor), but that still leaves the device itself on the
> component layer.

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