Ralph Shumaker wrote:
<Long string problem snipped>
What on earth are you doing?
This sounds like a bioinformatics string search. It's very much not a
brainteaser problem. There is at least one two volume set of some
whopping number of pages all about this stuff (Sorry, I don't remember
the name of the volumes).
You should search for something like "string algorithms" with sequence
or bioinformatics thrown in for good measure.
Good luck,
-a
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