Dear kwant developers,
I got the following error message when installing kwant.
Anton already helped me, but told me to send these error messages.
*bas@bas-HP-EliteBook-8530w:~$ sudo pip install kwant*
*Downloading/unpacking kwant*
* Downloading kwant-1.0.0.tar.gz (803kB): 803kB downloaded*
* Running setup.py (path:/tmp/pip_build_root/kwant/setup.py) egg_info for
package kwant*
* Traceback (most recent call last):*
* File "<string>", line 17, in <module>*
* File "/tmp/pip_build_root/kwant/setup.py", line 39, in <module>*
* int(n) for n in Cython.__version__.split('-')[0].split('.'))*
* File "/tmp/pip_build_root/kwant/setup.py", line 39, in <genexpr>*
* int(n) for n in Cython.__version__.split('-')[0].split('.'))*
* ValueError: invalid literal for int() with base 10: '1post0'*
* Complete output from command python setup.py egg_info:*
* Traceback (most recent call last):*
* File "<string>", line 17, in <module>*
* File "/tmp/pip_build_root/kwant/setup.py", line 39, in <module>*
* int(n) for n in Cython.__version__.split('-')[0].split('.'))*
* File "/tmp/pip_build_root/kwant/setup.py", line 39, in <genexpr>*
* int(n) for n in Cython.__version__.split('-')[0].split('.'))*
*ValueError: invalid literal for int() with base 10: '1post0'*
*----------------------------------------*
*Cleaning up...*
*Command python setup.py egg_info failed with error code 1 in
/tmp/pip_build_root/kwant*
*Storing debug log for failure in /home/bas/.pip/pip.log*
I used
*In [3]: cython.__version__*
*Out[3]: '0.20.1post0'*
Reinstalling cython gave me the following error after successfully
installing kwant trough pip.
Upon running kwant.test()
It gave me the following error:
*...........................................................................................E....
======================================================================
ERROR: kwant.tests.test_plotter.test_plot
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/usr/local/lib/python2.7/dist-packages/kwant/tests/test_plotter.py",
line 102, in test_plot
fig = plot(sys, site_color=color, cmap='binary', file=out)
File "/usr/local/lib/python2.7/dist-packages/kwant/plotter.py", line
1361, in plot
return output_fig(fig, file=file, show=show)
File "/usr/local/lib/python2.7/dist-packages/kwant/plotter.py", line
663, in output_fig
canvas.print_figure(file, *savefile_opts[0], **savefile_opts[1])
File "/usr/local/lib/python2.7/dist-packages/matplotlib/backend_bases.py",
line 2192, in print_figure
**kwargs)
File
"/usr/local/lib/python2.7/dist-packages/matplotlib/backends/backend_agg.py",
line 513, in print_png
FigureCanvasAgg.draw(self)
File
"/usr/local/lib/python2.7/dist-packages/matplotlib/backends/backend_agg.py",
line 461, in draw
self.figure.draw(self.renderer)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/artist.py",
line 59, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/figure.py",
line 1079, in draw
func(*args)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/artist.py",
line 59, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/axes/_base.py",
line 2075, in draw
a.draw(renderer)
File "/usr/local/lib/python2.7/dist-packages/kwant/plotter.py", line
117, in draw
return collections.Collection.draw(self, renderer)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/artist.py",
line 59, in draw_wrapper
draw(artist, renderer, *args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/matplotlib/collections.py",
line 301, in draw
self._offset_position)
File
"/usr/local/lib/python2.7/dist-packages/matplotlib/backends/backend_agg.py",
line 119, in draw_path_collection
return self._renderer.draw_path_collection(*kl, **kw)
ValueError: Transforms must be a Nx3x3 numpy array
----------------------------------------------------------------------
Ran 96 tests in 13.670s
FAILED (errors=1)*
I use: matplotlib.__version__
u'1.4.x'
Cheers,
Bas
