On 07/18/2013 12:01 PM, Kirk, Benjamin (JSC-EG311) wrote: > On Jul 18, 2013, at 8:59 AM, David Knezevic <dkneze...@seas.harvard.edu> > wrote: > >> The issue for me is that this also arises in a lot of application codes >> that me and my colleagues use. We can't use >> '-mat_new_nonzero_allocation_err false' for larger scale problems since >> it runs very slowly (presumably due to the mallocs). Is there a >> configure option for turning off blocked dofs? If so, I can just go >> ahead and use that (a bit cleaner than hard-coding block size to 1). > Indeed, I should have mentioned that before! > > elfboy(97)$ ./configure --help | grep blocked > --enable-blocked-storage > Support for blocked matrix/vector storage
OK, that's all good by me then, thanks! I'll use that for now. Longer term, it'd be good to understand what's causing the malloc issue. As Roy pointed out, it may be related to the additional matrices that are used in the RB code. ------------------------------------------------------------------------------ See everything from the browser to the database with AppDynamics Get end-to-end visibility with application monitoring from AppDynamics Isolate bottlenecks and diagnose root cause in seconds. Start your free trial of AppDynamics Pro today! http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk _______________________________________________ Libmesh-devel mailing list Libmesh-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/libmesh-devel
