Hi John
The program runns in opt mode. The information of system is as follows:
Mesh Information:
  mesh_dimension()=3
  spatial_dimension()=3
  n_nodes()=1331
  n_elem()=1000
   n_local_elem()=1000
   n_active_elem()=1000
  n_subdomains()=1
  n_processors()=1
  processor_id()=0

 EquationSystems
  n_systems()=1
   System "Stokes_Darcy"
    Type "LinearImplicit"
    Variables="u" "v" "w" "p"
    Finite Element Types="LAGRANGE" "LAGRANGE" "LAGRANGE" "LAGRANGE"
    Approximation Orders="SECOND" "SECOND" "SECOND" "FIRST"
    n_dofs()=16214
    n_local_dofs()=16214
    n_constrained_dofs()=2883
    n_vectors()=12

micro_fluid_loadcase11_assemble is the  performance log of calling the
function of assembling stiffness matrix.

 
-----------------------------------------------------------------------------------
| Main Program Performance: Alive time=5665.91, Active time=5515.65
|
 
-----------------------------------------------------------------------------------
| Event                              nCalls    Total       Avg
Percent of   |
|                                              Time        Time
Active Time  |
|-----------------------------------------------------------------------------------|
|
|
| micro_fluid_loadcase11_assemble    1         5515.6511   5515.651089
100.00       |
 
-----------------------------------------------------------------------------------
| Totals:                            1         5515.6511
100.00       |
 
-----------------------------------------------------------------------------------

Cheers
Shengli

2008/3/18, John Peterson <[EMAIL PROTECTED]>:
>
> It should not take 2 hours to assemble a system with 15,000 dofs.
> Something is seriously wrong, perhaps you are in debug mode?
>
> -J
>
>
> On Tue, Mar 18, 2008 at 9:02 PM, Shengli Xu <[EMAIL PROTECTED]>
> wrote:
> > Hi, Libmesh Users
> >  I find the stiffness matrix assembling is very slow at the first time.
> But
> >  it is very quickly at the second time and laters for the same system.
> >  It needs 2 hours to assemble the stiffness matrix of the 3d stokes
> system
> >  with 15,000 dofs. How to speed up the process of assembling the system
> >  stiffness matrix at the first time?
> >  I find the similar question in the maillist. The title is "assembling a
> >  PetscMatrix".
> >
> >  Sincerely
> >  Shengli
> >
> >
> >  --
> >  Best regards,
> >
> >  Yours sincerely
> >  ShengliXu
> >  Department of Engineering Mechanics
> >  State Key Laboratory of Structural Analysis for Industrial Equipment
> >  Dalian University of Technology
> >  Dalian, 116023, P. R. China
> >  Email: [EMAIL PROTECTED]
> >  ==========================
>
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>



-- 
Best regards,

Yours sincerely
ShengliXu
Department of Engineering Mechanics
State Key Laboratory of Structural Analysis for Industrial Equipment
Dalian University of Technology
Dalian, 116023, P. R. China
Email: [EMAIL PROTECTED]
==========================
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