I am attempting to compile libmesh on a cluster that uses mvapich and
icc , but I keep getting a compiler error. I don't know if this is
something you have seen before or if there is a work-around, short of
asking Intel.
Specifically, I am using
/share/apps/mvapich/intel/bin/mpicxx ,
and the cluster set-up currently only uses static libraries, so I have
used the --disable-shared flag when running configure for libmesh:
./configure --prefix=${HOME}/gmxLocal --enable-threads
--enable-float=no --enable-sse2 --enable-shared
I changed the configure.in file to choose icc as the C++ compiler, so I
believe everything is consistent.
autoconf configure.in > configure2
./configure2 --enable-everything --enable-second --disable-perflog
--disable-bzip2 --disable-vsmoother --disable-shared
During the compilation of partitioner_factory.C I get no warnings, but
the compilation suddenly dies:
bkrac...@prism2 ~/libmesh/ [1022] make
Compiling C++ (in debug mode) src/partitioning/partitioner_factory.C...
mpicxx -DDEBUG -Kc++eh -Krtti -O1 -w1 -g -wd504 -wd1572
-I/home/bkraczek/libmesh/include/base
-I/home/bkraczek/libmesh/include/enums
-I/home/bkraczek/libmesh/include/error_estimation
-I/home/bkraczek/libmesh/include/fe
-I/home/bkraczek/libmesh/include/geom
-I/home/bkraczek/libmesh/include/mesh
-I/home/bkraczek/libmesh/include/numerics
-I/home/bkraczek/libmesh/include/parallel
-I/home/bkraczek/libmesh/include/partitioning
-I/home/bkraczek/libmesh/include/quadrature
-I/home/bkraczek/libmesh/include/solvers
-I/home/bkraczek/libmesh/include/utils
-I/home/bkraczek/libmesh/contrib/boost
-I/home/bkraczek/libmesh/contrib/laspack
-I/home/bkraczek/libmesh/contrib/parmetis/Lib
-I/home/bkraczek/libmesh/contrib/metis/Lib
-I/home/bkraczek/libmesh/contrib/sfcurves
-I/home/bkraczek/libmesh/contrib/gzstream
-I/home/bkraczek/libmesh/contrib/tecplot/include
-I/home/bkraczek/libmesh/contrib/gmv
-I/home/bkraczek/libmesh/contrib/tetgen
-I/home/bkraczek/libmesh/contrib/triangle
-I/home/bkraczek/libmesh/contrib/exodusii/Lib/include
-I/home/bkraczek/libmesh/contrib/netcdf/Lib
-I/home/bkraczek/libmesh/contrib/nemesis/Lib
-I/home/bkraczek/libmesh/contrib/libHilbert/include
-I/share/apps/petsc/2.3.3/include
-I/share/apps/petsc/2.3.3/bmake/linux-gnu-c-debug
-I/share/apps/petsc/2.3.3/linux-gnu-c-debug/include
-I/share/apps/mvapich/intel/bin/include -c
src/partitioning/partitioner_factory.C -o
src/partitioning/partitioner_factory.x86_64-unknown-linux-gnu.dbg.o
(0): internal error: backend signals
compilation aborted for src/partitioning/partitioner_factory.C (code 4)
make: ***
[src/partitioning/partitioner_factory.x86_64-unknown-linux-gnu.dbg.o]
Error 4
So have you seen this before or should I bug Intel about it?
-Brent
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