Hi everyone, All of a sudden, I receive the following runtime-error whenever an application uses slepc:
dyld: lazy symbol binding failed: Symbol not found: _dhseqr Referenced from: /home/gerner/Software/libmesh/examples/ex16/./ex16-dbg Expected in: flat namespace dyld: Symbol not found: _dhseqr Referenced from: /home/gerner/Software/libmesh/examples/ex16/./ex16-dbg Expected in: flat namespace [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 5 TRAP [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: likely location of problem given in stack below [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [0]PETSC ERROR: INSTEAD the line number of the start of the function [0]PETSC ERROR: is given. [0]PETSC ERROR: [0] EPSDenseSchur line 480 src/eps/interface/dense.c [0]PETSC ERROR: [0] EPSProjectedArnoldi line 273 src/eps/impls/krylov/arnoldi/arnoldi.c [0]PETSC ERROR: [0] EPSSolve_ARNOLDI line 372 src/eps/impls/krylov/arnoldi/arnoldi.c [0]PETSC ERROR: [0] EPSSolve line 104 src/eps/interface/solve.c [0]PETSC ERROR: --------------------- Error Message ------------------------------------ [0]PETSC ERROR: Signal received! [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Petsc Release Version 3.1.0, Patch 8, Thu Mar 17 13:37:48 CDT 2011 [0]PETSC ERROR: See docs/changes/index.html for recent updates. [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [0]PETSC ERROR: See docs/index.html for manual pages. [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: ./ex16-dbg on a x86_64 named student50.local by gerner Thu Apr 21 10:13:47 2011 [0]PETSC ERROR: Libraries linked from /home/gerner/Software/petsc-3.1-p8/x86_64/lib [0]PETSC ERROR: Configure run at Wed Apr 20 17:23:37 2011 [0]PETSC ERROR: Configure options --with-fc=0 --with-mpi=1 --with-x11=1 --with-umfpack=1 --download-umfpack=yes [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown file -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 0 in communicator MPI COMMUNICATOR 3 DUP FROM 0 with errorcode 59. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. Program received signal SIGTRAP, Trace/breakpoint trap. 0x00007fff5fc01065 in __dyld_dyld_fatal_error () (gdb) bt #0 0x00007fff5fc01065 in __dyld_dyld_fatal_error () #1 0x00007fff5fc04721 in __dyld__ZN4dyld4haltEPKc () #2 0x00007fff5fc047b1 in __dyld__ZN4dyld18fastBindLazySymbolEPP11ImageLoaderm () #3 0x00007fff88af6f76 in dyld_stub_binder () #4 0x0000000100a582e8 in pvars () #5 0x0000000100051ded in EPSProjectedArnoldi (eps=0x103865810, S=0x103878210, lds=15, Q=0x1038a3a10, n=15) at arnoldi.c:279 #6 0x0000000100053678 in EPSSolve_ARNOLDI (eps=0x103865810) at arnoldi.c:419 #7 0x000000010002ebfa in EPSSolve (eps=0x103865810) at solve.c:146 #8 0x00000001012e0f2e in libMesh::SlepcEigenSolver<double>::_solve_standard_helper () #9 0x00000001012e1669 in libMesh::SlepcEigenSolver<double>::solve_standard () #10 0x00000001012faf4b in libMesh::EigenSystem::solve () #11 0x0000000100002334 in main () Many thanks for any suggestions on this. -Anna ------------------------------------------------------------------------------ Benefiting from Server Virtualization: Beyond Initial Workload Consolidation -- Increasing the use of server virtualization is a top priority.Virtualization can reduce costs, simplify management, and improve application availability and disaster protection. Learn more about boosting the value of server virtualization. http://p.sf.net/sfu/vmware-sfdev2dev _______________________________________________ Libmesh-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/libmesh-users
