Hi all, I configured libmesh with petsc-3.2-p5 and slepc-3.2-p1 with the following options for a Mac 10.6.8:
./configure --prefix=/Users/aeronova/Development/local/lib64/libmesh --enable-petsc --enable-slepc --enable-glpk --with-glpk-include=/Users/aeronova/Development/local/lib64/glpk/glpk-4.45/include --with-glpk-lib=/Users/aeronova/Development/local/lib64/glpk/glpk-4.45/lib --enable-ifem --enable-eigen --with-eigen-include=/Users/aeronova/Development/local/lib64/Eigen/include/eigen3 There were no errors for the libmesh build, but I got run time errors for ex29 and ex30 when I tested the library. I'd appreciate if someone could help me with the problems. K. Lee. ex29: Compiling C++ (in debug mode) ex29.C... Linking ex29-dbg... *************************************************************** * Running Example ./ex29-dbg *************************************************************** Triangulating an L-shaped domain with holes Assertion `obj_procid != DofObject::invalid_processor_id' failed. [0] /Users/aeronova/Development/local/lib64/libmesh/include/parallel/parallel_ghost_sync.h, line 249, compiled Nov 14 2011 at 09:37:23 terminate called after throwing an instance of 'libMesh::LogicError' what(): Error in libMesh internal logic make[2]: *** [run] Abort trap make[1]: *** [run] Error 1 make: *** [run_examples] Error 2 ex30: [0]PETSC ERROR: --------------------- Error Message ------------------------------------ [0]PETSC ERROR: Object is in wrong state! [0]PETSC ERROR: Not for unassembled matrix! [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Petsc Release Version 3.2.0, Patch 5, Sat Oct 29 13:45:54 CDT 2011 [0]PETSC ERROR: See docs/changes/index.html for recent updates. [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [0]PETSC ERROR: See docs/index.html for manual pages. [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: ./ex30-dbg on a arch-darw named ken-pc.sutd.edu.sg by aeronova Mon Nov 14 09:52:54 2011 [0]PETSC ERROR: Libraries linked from /Users/aeronova/Development/local/lib64/petsc/petsc-3.2-p5/lib [0]PETSC ERROR: Configure run at Mon Nov 14 08:24:55 2011 [0]PETSC ERROR: Configure options --prefix=/Users/aeronova/Development/local/lib64/petsc/petsc-3.2-p5 --download-mpich=1 --download-blacs=1 --download-parmetis=1 --download-scalapack=1 --download-mumps=1 --download-umfpack=1 --with-clanguage=C++ --with-fc=g95 [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: MatGetRow() line 350 in /Users/aeronova/Development/local/src/petsc-3.2-p5/src/mat/interface/matrix.c [0]PETSC ERROR: MatAXPY_BasicWithPreallocation() line 98 in /Users/aeronova/Development/local/src/petsc-3.2-p5/src/mat/utils/axpy.c [0]PETSC ERROR: MatAXPY_SeqAIJ() line 2718 in /Users/aeronova/Development/local/src/petsc-3.2-p5/src/mat/impls/aij/seq/aij.c [0]PETSC ERROR: MatAXPY() line 39 in /Users/aeronova/Development/local/src/petsc-3.2-p5/src/mat/utils/axpy.c [0]PETSC ERROR: add() line 566 in "unknowndirectory/"/Users/aeronova/Development/local/lib64/libmesh/include/numerics/petsc_matrix.h application called MPI_Abort(comm=0x84000000, 73) - process 0 [unset]: aborting job: application called MPI_Abort(comm=0x84000000, 73) - process 0 ------------------------------------------------------------------------------ RSA(R) Conference 2012 Save $700 by Nov 18 Register now http://p.sf.net/sfu/rsa-sfdev2dev1 _______________________________________________ Libmesh-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/libmesh-users
