So config.guess and config.sub contain code to determine your system type - in 
guessing what you had was from an older invocation of bootstrap, which wrote 
config files that clearly didn't know about your new OS. 

Then maybe you updated the OS either explicitly or through the apple update 
tool?

In any case, rerunning bootstrap would have generated new config.* files that 
had better understand the platform you are running!

So is all well then?

-Ben



On Sep 17, 2012, at 11:08 AM, "Paul Hui Sun" <[email protected]> wrote:

> Yes, I just tried ./bootstrap, and then ./configure, this time it works now. 
> I'm wondering if the options I give before has some errors? Here is the 
> config.log as attached.  
> <config.log>
> 
> 
> 
> On Sep 17, 2012, at 8:57 AM, "Kirk, Benjamin (JSC-EG311)" 
> <[email protected]> wrote:
> 
>> Looks like this is a very new OS - and is this the libmesh.automake branch?
>> 
>> Have you rerun ./bootstrap before running configure?
>> 
>> The output line
>> "configure:2970: error: /bin/sh ./config.sub   failed"
>> 
>> Is clearly unexpected!
>> 
>> -Ben 
>> 
> 

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