On Monday, December 3, 2012, Jim Fonseca wrote: > Hi, > When I build my code I'm getting a linking problem because my code as well > as other libraries are using the thread safe libmpi_mt.so library, but > libmesh is building with libmpi.so > What's the best approach to fixing this?
Hmm... Are you using mpicxx Et al to compile libmesh? What does mpicxx -show say? We are basically going to link against whatever it links to. > MPI is installed on our cluster so > I don't have direct access to that. I see in the libmesh configuration > where it's looking for libmpi.so, but I'm not sure if trying to tell > libmesh to use libmpi_mt is a good idea. I was thinking of trying to try > configure's LIBS but I feel like that wouldn't work. > > ld: MPIR_Thread: TLS definition in /apps/rhel5/intel/impi/ > 4.1.0.024/intel64/lib/libmpi_mt.so.4< > http://4.1.0.20/intel64/lib/libmpi_mt.so.4> > section > .tbss mismatches non-TLS definition in /apps/rhel5/intel/impi/ > 4.1.0.024/intel64/lib/libmpi.so <http://4.1.0.20/intel64/lib/libmpi.so> > section > .bss > /apps/rhel5/intel/impi/4.1.0.024/intel64/lib/libmpi_mt.so.4< > http://4.1.0.20/intel64/lib/libmpi_mt.so.4>: > could not read symbols: Bad value > > Thanks, > Jim > > -- > Jim Fonseca, PhD > Research Scientist > Network for Computational Nanotechnology > Purdue University > 765-496-6495 > www.jimfonseca.com > > ------------------------------------------------------------------------------ > LogMeIn Rescue: Anywhere, Anytime Remote support for IT. Free Trial > Remotely access PCs and mobile devices and provide instant support > Improve your efficiency, and focus on delivering more value-add services > Discover what IT Professionals Know. Rescue delivers > http://p.sf.net/sfu/logmein_12329d2d > _______________________________________________ > Libmesh-users mailing list > [email protected] <javascript:;> > https://lists.sourceforge.net/lists/listinfo/libmesh-users > -- John ------------------------------------------------------------------------------ LogMeIn Rescue: Anywhere, Anytime Remote support for IT. Free Trial Remotely access PCs and mobile devices and provide instant support Improve your efficiency, and focus on delivering more value-add services Discover what IT Professionals Know. Rescue delivers http://p.sf.net/sfu/logmein_12329d2d _______________________________________________ Libmesh-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/libmesh-users
