Sorry for my sluggish reply Ernesto. Are you configuring with --with-metis=PETSc? If so, it looks like the PETSc install on Lonestar only has ParMetis and not plain old Metis.
I haven't looked, but does --with-metis=PETSc suck up parmetis as well and can we have configure just use parmetis then and not use Metis (surely ParMetis can function in serial mode?)? On Fri, Mar 8, 2013 at 4:26 PM, Roy Stogner <royst...@ices.utexas.edu>wrote: > > > On Fri, 8 Mar 2013, Ernesto Prudencio wrote: > > > Any obvious mistake from my part? > > Nothing obviously wrong; I'm copying libmesh-users in case someone > else sees something I missed. Email me the entire screen output (I > want to see Metis getting built) and the config.log file? > > Thanks, > --- > Roy > > > ------------------------------------------------------------- > > > > Screen output during 'make': > > > > ... > > ... > > ... > > CXX src/utils/libmesh_devel_la-tree.lo > > CXX src/utils/libmesh_devel_la-tree_node.lo > > CXX src/utils/libmesh_devel_la-utility.lo > > CXX src/utils/libmesh_devel_la-xdr_cxx.lo > > CXXLD libmesh_devel.la > > > > *** Warning: Linking the shared library libmesh_devel.la against the > > *** static library > ./contrib/tecplot/lib/x86_64-unknown-linux-gnu/tecio.a is > > not portable! > > CXX src/apps/meshtool_opt-meshtool.o > > CXXLD meshtool-opt > > /opt/apps/intel/11.1/lib/intel64/libimf.so: warning: warning: > feupdateenv is > > not implemented and will always fail > > ./.libs/libmesh_opt.so: undefined reference to `METIS_PartGraphRecursive' > > ./.libs/libmesh_opt.so: undefined reference to `METIS_PartGraphKway' > > make[1]: *** [meshtool-opt] Error 1 > > make[1]: Leaving directory > > `/work/01001/prudenci/DownloadPackages/libmesh-0.9.0' > > make: *** [all-recursive] Error 1 > > > > ------------------------------------------------------------- > > > > My profile_user reads: > > > > echo "entering profile_user" > > > > module load autotools > > module load subversion > > #module swap pgi intel > > module load mkl > > module load gsl boost hdf5 grvy > > #module load petsc > > #module load arpack > > module load python/2.7.1 > > #module load vtk > > #module load trilinos > > #module load libmesh > > #module load tbb > > module load fftw2/2.1.5 > > export CC=icc > > export CXX=icpc > > export FC=ifort > > export F90=ifort > > export F77=ifort > > export CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK > > export > > > LD_LIBRARY_PATH=/home1/01001/prudenci/Installations/queso_0_45_official/lib:/opt/apps/intel11_1/boost/1.45.0/lib:$TACC_HDF5_DIR/lib:$TACC_GRVY_DIR/lib:/corral/pecos/LIBRARIES/TRILINOS/trilinos-9.0\ > > .3-intel-11.1-mkl-11.1-mvapich2-1.6/lib/:$LD_LIBRARY_PATH > > export SVN_EDITOR=emacs > > #export BOOST_DIR=$TACC_BOOST_DIR > > export HDF5_DIR=$TACC_HDF5_DIR > > export GRVY_DIR=$TACC_GRVY_DIR > > > > echo "leaving profile_user" > > unset autologout > > > > ------------------------------------------------------------- > > > > Thanks, > > > > Ernesto. > > > > > > > ------------------------------------------------------------------------------ > Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester > Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the > endpoint security space. For insight on selecting the right partner to > tackle endpoint security challenges, access the full report. > http://p.sf.net/sfu/symantec-dev2dev > _______________________________________________ > Libmesh-users mailing list > Libmesh-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/libmesh-users > ------------------------------------------------------------------------------ Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the endpoint security space. For insight on selecting the right partner to tackle endpoint security challenges, access the full report. http://p.sf.net/sfu/symantec-dev2dev _______________________________________________ Libmesh-users mailing list Libmesh-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/libmesh-users
