Hi Cody,

Thank you. Usually configure selects clang. Will check it.

Regards, Rob

Sent from my iPhone

On May 12, 2013, at 14:03, Cody Permann <[email protected]> wrote:

> Hi Rob,
> 
> It looks like you are using Apple's GCC compiler branch (version
> 4.2.1).  That compiler has been broken for quite awhile.  If you are
> indeed using that compiler, let me suggest that you try either GCC
> from Mac Ports, or Clang.
> 
> Cody
> 
> Sent from my iPad
> 
> On May 12, 2013, at 2:37 PM, Robert J Goedman <[email protected]> wrote:
> 
>> Hi,
>> 
>> Just installed the library and attempted to run 'make check'. Passed many 
>> all tests before this test. Hope this helps.
>> 
>> Regards,
>> Rob J. Goedman
>> [email protected]
>> 
>> ...
>> ***************************************************************
>> * Done Running Example adaptivity_ex1:
>> *   example-opt
>> ***************************************************************
>> PASS: run.sh
>> =============
>> 1 test passed
>> =============
>> Making check in adaptivity/adaptivity_ex2
>> make  check-am
>> make  example-dbg example-devel example-opt   run.sh
>> CXX      example_dbg-adaptivity_ex2.o
>> CXX      example_dbg-exact_solution.o
>> CXXLD    example-dbg
>> CXX      example_devel-adaptivity_ex2.o
>> CXX      example_devel-exact_solution.o
>> CXXLD    example-devel
>> CXX      example_opt-adaptivity_ex2.o
>> CXX      example_opt-exact_solution.o
>> CXXLD    example-opt
>> make[4]: Nothing to be done for `run.sh'.
>> make  check-TESTS
>> ***************************************************************
>> * Running Example adaptivity_ex2:
>> *   example-dbg -n_timesteps 25 -n_refinements 5 -output_freq 10 
>> -init_timestep 0
>> ***************************************************************
>> 
>> Usage:
>>    
>> /Users/rob/Projects/libmesh-0.9.1/examples/adaptivity/adaptivity_ex2/.libs/example-dbg
>>  -init_timestep 0
>> OR
>>    
>> /Users/rob/Projects/libmesh-0.9.1/examples/adaptivity/adaptivity_ex2/.libs/example-dbg
>>  -read_solution -init_timestep 26
>> 
>> Running: 
>> /Users/rob/Projects/libmesh-0.9.1/examples/adaptivity/adaptivity_ex2/.libs/example-dbg
>>  -n_timesteps 25 -n_refinements 5 -output_freq 10 -init_timestep 0
>> 
>> Mesh Information:
>> mesh_dimension()=2
>> spatial_dimension()=3
>> n_nodes()=6273
>>   n_local_nodes()=6273
>> n_elem()=13650
>>   n_local_elem()=13650
>>   n_active_elem()=10240
>> n_subdomains()=1
>> n_partitions()=1
>> n_processors()=1
>> n_threads()=1
>> processor_id()=0
>> 
>> Failed to convert N7libMesh6SystemE pointer to 
>> PN7libMesh15TransientSystemINS_20LinearImplicitSystemEEE
>> The N7libMesh6SystemE appears to be a 
>> N7libMesh15TransientSystemINS_20LinearImplicitSystemEEE
>> Stack frames: 9
>> 0: 0   libmesh_dbg.0.dylib                 0x0000000100e1c1fc 
>> libMesh::print_trace(std::ostream&) + 44
>> 1: 1   example-dbg                         0x0000000100ca4417 
>> libMesh::TransientSystem<libMesh::LinearImplicitSystem>* 
>> libMesh::libmesh_cast_ptr<libMesh::TransientSystem<libMesh::LinearImplicitSystem>*,
>>  libMesh::System>(libMesh::System*) + 487
>> 2: 2   example-dbg                         0x0000000100ca4835 
>> libMesh::TransientSystem<libMesh::LinearImplicitSystem>& 
>> libMesh::EquationSystems::get_system<libMesh::TransientSystem<libMesh::LinearImplicitSystem>
>>  >(std::string const&) + 637
>> 3: 3   example-dbg                         0x0000000100c7e7de 
>> init_cd(libMesh::EquationSystems&, std::string const&) + 686
>> 4: 4   libmesh_dbg.0.dylib                 0x000000010195165d 
>> libMesh::System::user_initialization() + 73
>> 5: 5   libmesh_dbg.0.dylib                 0x000000010196a8ec 
>> libMesh::System::init() + 120
>> 6: 6   libmesh_dbg.0.dylib                 0x00000001018dd206 
>> libMesh::EquationSystems::init() + 1578
>> 7: 7   example-dbg                         0x0000000100c7fb1d main + 3901
>> 8: 8   libdyld.dylib                       0x00007fff8c9d27e1 start + 0
>> [0] ../../../include/libmesh/libmesh_common.h, line 344, compiled May 12 
>> 2013 at 13:06:33
>> libc++abi.dylib: terminate called throwing an exception
>> /Users/rob/Projects/libmesh-0.9.1/examples/run_common.sh: line 50: 72489 
>> Abort trap: 6           $LIBMESH_RUN ./$executable $options $LIBMESH_OPTIONS
>> FAIL: run.sh
>> ====================================================
>> 1 of 1 test failed
>> Please report to [email protected]
>> ====================================================
>> make[4]: *** [check-TESTS] Error 1
>> make[3]: *** [check-am] Error 2
>> make[2]: *** [check] Error 2
>> make[1]: *** [check-recursive] Error 1
>> make: *** [check-recursive] Error 1
>> robs-15inch-2:libmesh-0.9.1 rob$
>> 
>> 
>> ------------------------------------------------------------------------------
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------------------------------------------------------------------------------
Learn Graph Databases - Download FREE O'Reilly Book
"Graph Databases" is the definitive new guide to graph databases and 
their applications. This 200-page book is written by three acclaimed 
leaders in the field. The early access version is available now. 
Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
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