Thanks Ben,
Could you please take a look at where it is failing (config.log attached).
For 0.9.2.1
Here is the line that's failing from make -n and the output when I run it.
I've
$ /bin/sh ./libtool --silent --tag=CXX --mode=link CC -O2
-felide-constructors -funroll-loops -fstrict-aliasing
-Wdisabled-optimization -fopenmp -o getpot_parse-opt
src/apps/getpot_parse_opt-getpot_parse.o
libmesh_opt.la-L/opt/cray/hdf5-parallel/1.8.9/cray/81/lib
-L/u/sciteam/jfonseca/group/NEMO5_PETSc3.4_no_MAGMA_new_libmesh/libs/petsc/build-real/arch-linux2-cxx-opt/lib
-lpetscts -lpetscsnes -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetscsys
-Wl,-rpath,/u/sciteam/jfonseca/group/NEMO5_PETSc3.4_no_MAGMA_new_libmesh/libs/petsc/build-real/arch-linux2-cxx-opt/lib
-lsuperlu_dist_3.3 -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common
-lpord -lparmetis -lmetis
-Wl,-rpath,/opt/cray/hdf5-parallel/1.8.9/cray/81/lib -lhdf5_fortran
-lhdf5_hl -lhdf5
-L/opt/cray/papi/5.1.0.2/perf_events/no-cuda/lib-L/opt/cray/udreg/2.3.2-1.0401.5929.3.3.gem/lib64
-L/opt/cray/ugni/4.0-1.0401.5928.9.5.gem/lib64
-L/opt/cray/pmi/4.0.1-1.0000.9421.73.3.gem/lib64
-L/opt/cray/dmapp/3.2.1-1.0401.5983.4.5.gem/lib64
-L/opt/cray/xpmem/0.1-2.0401.36790.4.3.gem/lib64
-L/opt/cray/rca/1.0.0-2.0401.38656.2.2.gem/lib64
-L/opt/cray/mpt/5.6.4/gni/mpich2-gnu/47/lib
-L/opt/cray/libsci/12.0.01/gnu/47/interlagos/lib -L/opt/fftw/
3.3.0.2/interlagos/lib -L/opt/cray/hdf5-parallel/1.8.9/gnu/47/lib
-L/opt/cray/xe-sysroot/4.1.40/usr/lib64 -L/opt/cray/xe-sysroot/4.1.40/lib64
-L/opt/cray/xe-sysroot/4.1.40/usr/lib/alps -L/usr/lib/alps
-L/opt/gcc/4.7.2/snos/lib/gcc/x86_64-suse-linux/4.7.2
-L/opt/gcc/4.7.2/snos/lib64 -L/opt/gcc/4.7.2/snos/lib
-L/opt/cray/atp/1.6.2/lib -lhdf5hl_fortran_gnu_parallel
-lhdf5_fortran_gnu_parallel -lmpichf90_gnu_47 -lquadmath -lm
-lmpichcxx_gnu_47 -lpapi -lrca -lAtpSigHCommData -lAtpSigHandler -lgfortran
-lhdf5_hl_gnu_parallel -lhdf5_gnu_parallel -lz -lscicpp_gnu -lsci_gnu_mp
-lstdc++ -lfftw3_mpi -lfftw3f_mpi -lfftw3_threads -lfftw3f_threads -lfftw3
-lfftw3f -lmpich_gnu_47 -lmpl -lrt -lxpmem -ldmapp -lugni -lpmi -lalpslli
-lalpsutil -ludreg -lpthread -lgomp -lgcc_eh -ldl
/usr/bin/ld: attempted static link of dynamic object
`./.libs/libmesh_opt.so'
collect2: error: ld returned 1 exit status
I was able to build 0.9.2-rc1 previously (config.log is attached for that).
Still looking into what may be different.
Thanks,
Jim
On Tue, Aug 20, 2013 at 4:05 PM, Kirk, Benjamin (JSC-EG311) <
[email protected]> wrote:
> On Aug 20, 2013, at 4:01 PM, Jim Fonseca <[email protected]>
> wrote:
>
> > yes, we are doing make install. but your explanation helped to resolve
> that issue--thanks!
> >
> > Unfortunately I see I've created a problem with two different
> discussions on the same thread but at least that first one is solved. Still
> looking into the dynamic build issue...trying to narrow it down...
> >
> > Jim
>
> Good!
>
> Consider this an open request to get access to troubling machines - be it
> this Cray or the previously mentioned Blue Gene - I'm happy to see what I
> can do to make things work.
>
> -Ben
>
>
--
Jim Fonseca, PhD
Research Scientist
Network for Computational Nanotechnology
Purdue University
765-496-6495
www.jimfonseca.com
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