Copying this to libmesh-users in case someone knows something I don't
about the exodusII input.

On Mon, 16 Dec 2013, Sahai, Amal wrote:

> I am having some trouble getting the right results for my new
> meshes.

What's the failure look like?

> Would the direction of the normal of the boundary surface (or edge
> in this case) while the domain is being defined in gridgen affect
> the way the mesh is read by FINS?

I don't believe so.  Element node ordering matters to us, but ExodusII
has a canonical ordering that we translate to our own correctly.
Boundary vectors get generated by us from the element mapping defined
by the node ordering.

> I am currently using a mesh that has the normals pointing inwards
> for all the edges. Is this information utilized by LIBMESH while
> reading the mesh?

Not to my knowledge; hopefully one of the other libMesh developers
will chime in if I'm wrong.

If you're having troubles at boundaries, I have one suspicion: did you
happen to define your boundary conditions as node sets rather than
side sets?  I got a grid recently from an experienced gridgen user
which had that problem; it worked for me because the app and BCs I was
using happened to work with nodal Dirichlet conditions, but FIN-S
(like most libMesh apps) expects boundary IDs to be defined on faces,
not points.
---
Roy

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