Hello, I have a problem with libmesh installation:
<<< C++ compiler is unknown but accepted gcc version >>> checking for a sed that does not truncate output... /usr/bin/sed checking for C++ compiler vendor... gnu configure: error: libMesh now requires C++11 The log file is attached. Thank you, Michael.
This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by libmesh configure 1.6.0, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0 PETSC_ARCH=linux F77=mpif77 CC=mpicc GCC=gcc CXX=mpicxx --enable-vtk --with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6 --with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6 --disable-tetgen --disable-nemesis --enable-parmesh --enable-amr --enable-shared=yes --disable-cxx11 --enable-legacy-include-paths --disable-strict-lgpl --with-methods=opt --disable-examples --enable-slepc ## --------- ## ## Platform. ## ## --------- ## hostname = remotesession.agave.rc.asu.edu uname -m = x86_64 uname -r = 3.10.0-1160.6.1.el7.x86_64 uname -s = Linux uname -v = #1 SMP Tue Nov 17 13:59:11 UTC 2020 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /packages/7x/gsl/2.6/bin PATH: /packages/7x/openmpi/agave/3.1.6/gcc/9.2.0/normal/bin PATH: /packages/7x/hwloc/1.11.13/bin PATH: /packages/7x/gcc/gcc-9.2.0/bin PATH: /packages/7x/binutils/2.29.1/bin PATH: /usr/lib64/qt-3.3/bin PATH: /home/mpovolo1/perl5/bin PATH: /packages/scripts PATH: /usr/local/cuda/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /bin PATH: /usr/bin PATH: /usr/X11R6/bin PATH: /packages/sysadmin/agave/scripts/ PATH: /packages/7x/perl5lib/bin PATH: /home/mpovolo1/.local/bin PATH: /home/mpovolo1/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3683: result: --------------------------------------------- configure:3685: result: ----------- Configuring libMesh ------------- configure:3687: result: --------------------------------------------- configure:3729: checking build system type configure:3743: result: x86_64-pc-linux-gnu configure:3763: checking host system type configure:3776: result: x86_64-pc-linux-gnu configure:3796: checking target system type configure:3809: result: x86_64-pc-linux-gnu configure:3882: checking for a BSD-compatible install configure:3950: result: /usr/bin/install -c configure:3961: checking whether build environment is sane configure:4016: result: yes configure:4167: checking for a thread-safe mkdir -p configure:4206: result: /usr/bin/mkdir -p configure:4213: checking for gawk configure:4229: found /usr/bin/gawk configure:4240: result: gawk configure:4251: checking whether make sets $(MAKE) configure:4273: result: yes configure:4302: checking whether make supports nested variables configure:4319: result: yes configure:4408: checking whether UID '2138550' is supported by ustar format configure:4414: result: no configure:4418: checking whether GID '2138550' is supported by ustar format configure:4424: result: no configure:4429: checking how to create a ustar tar archive configure:4483: tardir=conftest.dir && eval false >conftest.tar configure:4486: $? = 1 configure:4511: result: none configure:4574: checking whether make supports nested variables configure:4591: result: yes configure:4630: checking whether to enable maintainer-specific portions of Makefiles configure:4639: result: no configure:4659: checking for src/base/libmesh.C configure:4672: result: yes configure:4711: checking for perl configure:4729: found /usr/bin/perl configure:4741: result: /usr/bin/perl configure:4977: result: <<< Could not find a viable PETSc Makefile to determine PETSC_CC_INCLUDES, etc. >>> configure:5062: checking whether make supports the include directive configure:5077: make -f confmf.GNU && cat confinc.out make[1]: Entering directory `/home/mpovolo1/Work/atom.git/trunk/libs/libmesh/libmesh-1.6.0' make[1]: Leaving directory `/home/mpovolo1/Work/atom.git/trunk/libs/libmesh/libmesh-1.6.0' this is the am__doit target configure:5080: $? = 0 configure:5099: result: yes (GNU style) configure:5254: checking for C compiler version configure:5263: mpicc --version >&5 gcc (GCC) 9.2.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5274: $? = 0 configure:5263: mpicc -v >&5 Using built-in specs. COLLECT_GCC=/packages/7x/gcc/gcc-9.2.0/bin/gcc COLLECT_LTO_WRAPPER=/packages/7x/gcc/gcc-9.2.0/libexec/gcc/x86_64-pc-linux-gnu/9.2.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../gcc-9.2.0/configure --prefix=/packages/7x/gcc/gcc-9.2.0 --enable-threads=posix --enable-shared --with-gnu-as --with-gnu-ld --enable-languages=c,c++,fortran,objc,obj-c++,lto,go --with-diagnostics-color=auto Thread model: posix gcc version 9.2.0 (GCC) configure:5274: $? = 0 configure:5263: mpicc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:5274: $? = 1 configure:5263: mpicc -qversion >&5 gcc: error: unrecognized command line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:5274: $? = 1 configure:5294: checking whether the C compiler works configure:5316: mpicc -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5320: $? = 0 configure:5368: result: yes configure:5371: checking for C compiler default output file name configure:5373: result: a.out configure:5379: checking for suffix of executables configure:5386: mpicc -o conftest -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5390: $? = 0 configure:5412: result: configure:5434: checking whether we are cross compiling configure:5442: mpicc -o conftest -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5446: $? = 0 configure:5453: ./conftest configure:5457: $? = 0 configure:5472: result: no configure:5477: checking for suffix of object files configure:5499: mpicc -c -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5503: $? = 0 configure:5524: result: o configure:5528: checking whether we are using the GNU C compiler configure:5547: mpicc -c -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5547: $? = 0 configure:5556: result: yes configure:5565: checking whether mpicc accepts -g configure:5585: mpicc -c -g conftest.c >&5 configure:5585: $? = 0 configure:5626: result: yes configure:5643: checking for mpicc option to accept ISO C89 configure:5706: mpicc -c -Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO conftest.c >&5 cc1: warning: command line option '-felide-constructors' is valid for C++/ObjC++ but not for C configure:5706: $? = 0 configure:5719: result: none needed configure:5744: checking whether mpicc understands -c and -o together configure:5766: mpicc -c conftest.c -o conftest2.o configure:5769: $? = 0 configure:5766: mpicc -c conftest.c -o conftest2.o configure:5769: $? = 0 configure:5781: result: yes configure:5800: checking dependency style of mpicc configure:5911: result: gcc3 configure:6075: checking for Fortran compiler version configure:6084: /packages/7x/gcc/gcc-9.2.0/bin/gfortran --version >&5 GNU Fortran (GCC) 9.2.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6095: $? = 0 configure:6084: /packages/7x/gcc/gcc-9.2.0/bin/gfortran -v >&5 Using built-in specs. COLLECT_GCC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran COLLECT_LTO_WRAPPER=/packages/7x/gcc/gcc-9.2.0/libexec/gcc/x86_64-pc-linux-gnu/9.2.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../gcc-9.2.0/configure --prefix=/packages/7x/gcc/gcc-9.2.0 --enable-threads=posix --enable-shared --with-gnu-as --with-gnu-ld --enable-languages=c,c++,fortran,objc,obj-c++,lto,go --with-diagnostics-color=auto Thread model: posix gcc version 9.2.0 (GCC) configure:6095: $? = 0 configure:6084: /packages/7x/gcc/gcc-9.2.0/bin/gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6095: $? = 1 configure:6084: /packages/7x/gcc/gcc-9.2.0/bin/gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:6095: $? = 1 configure:6104: checking whether we are using the GNU Fortran compiler configure:6117: /packages/7x/gcc/gcc-9.2.0/bin/gfortran -c conftest.F >&5 configure:6117: $? = 0 configure:6126: result: yes configure:6132: checking whether /packages/7x/gcc/gcc-9.2.0/bin/gfortran accepts -g configure:6143: /packages/7x/gcc/gcc-9.2.0/bin/gfortran -c -g conftest.f >&5 configure:6143: $? = 0 configure:6151: result: yes configure:6305: checking for Fortran 77 compiler version configure:6314: mpif77 --version >&5 GNU Fortran (GCC) 9.2.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6325: $? = 0 configure:6314: mpif77 -v >&5 Using built-in specs. COLLECT_GCC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran COLLECT_LTO_WRAPPER=/packages/7x/gcc/gcc-9.2.0/libexec/gcc/x86_64-pc-linux-gnu/9.2.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../gcc-9.2.0/configure --prefix=/packages/7x/gcc/gcc-9.2.0 --enable-threads=posix --enable-shared --with-gnu-as --with-gnu-ld --enable-languages=c,c++,fortran,objc,obj-c++,lto,go --with-diagnostics-color=auto Thread model: posix gcc version 9.2.0 (GCC) configure:6325: $? = 0 configure:6314: mpif77 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6325: $? = 1 configure:6314: mpif77 -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:6325: $? = 1 configure:6334: checking whether we are using the GNU Fortran 77 compiler configure:6347: mpif77 -c conftest.F >&5 configure:6347: $? = 0 configure:6356: result: yes configure:6362: checking whether mpif77 accepts -g configure:6373: mpif77 -c -g conftest.f >&5 configure:6373: $? = 0 configure:6381: result: yes configure:6623: checking for C++ compiler version configure:6632: mpicxx --version >&5 g++ (GCC) 9.2.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6643: $? = 0 configure:6632: mpicxx -v >&5 Using built-in specs. COLLECT_GCC=/packages/7x/gcc/gcc-9.2.0/bin/g++ COLLECT_LTO_WRAPPER=/packages/7x/gcc/gcc-9.2.0/libexec/gcc/x86_64-pc-linux-gnu/9.2.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: ../gcc-9.2.0/configure --prefix=/packages/7x/gcc/gcc-9.2.0 --enable-threads=posix --enable-shared --with-gnu-as --with-gnu-ld --enable-languages=c,c++,fortran,objc,obj-c++,lto,go --with-diagnostics-color=auto Thread model: posix gcc version 9.2.0 (GCC) configure:6643: $? = 0 configure:6632: mpicxx -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:6643: $? = 1 configure:6632: mpicxx -qversion >&5 g++: error: unrecognized command line option '-qversion'; did you mean '--version'? g++: fatal error: no input files compilation terminated. configure:6643: $? = 1 configure:6647: checking whether we are using the GNU C++ compiler configure:6666: mpicxx -c conftest.cpp >&5 configure:6666: $? = 0 configure:6675: result: yes configure:6684: checking whether mpicxx accepts -g configure:6704: mpicxx -c -g conftest.cpp >&5 configure:6704: $? = 0 configure:6745: result: yes configure:6770: checking dependency style of mpicxx configure:6881: result: gcc3 configure:6946: result: <<< C++ compiler is unknown but accepted gcc version >>> configure:7121: checking for a sed that does not truncate output configure:7185: result: /usr/bin/sed configure:7191: checking for C++ compiler vendor configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__ICC) || defined(__ECC) || defined(__INTEL_COMPILER)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__xlc__) || defined(__xlC__) || defined(__IBMC__) || defined(__IBMCPP__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__PATHCC__) || defined(__PATHSCALE__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__clang__)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(_CRAYC)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__FUJITSU)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp:17:38: error: operator "defined" requires an identifier 17 | #if !(defined(SDCC) || defined()) | ^ conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(SDCC) || defined()) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 conftest.cpp: In function 'int main()': conftest.cpp:18:9: error: 'thisisanerror' was not declared in this scope 18 | thisisanerror; | ^~~~~~~~~~~~~ configure:7239: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.6.0" | #define PACKAGE_STRING "libmesh 1.6.0" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" | #define PACKAGE "libmesh" | #define VERSION "1.6.0" | /* end confdefs.h. */ | | int | main () | { | | #if !(defined(__SDCC)) | thisisanerror; | #endif | | ; | return 0; | } configure:7239: mpicxx -c conftest.cpp >&5 configure:7239: $? = 0 configure:7247: result: gnu configure:7674: error: libMesh now requires C++11 ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes 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LIBMESH_ENABLE_EXODUS_V522_TRUE='' LIBMESH_ENABLE_FPARSER_FALSE='' LIBMESH_ENABLE_FPARSER_TRUE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_CPPUNIT_FALSE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_CPPUNIT_TRUE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_FALSE='' LIBMESH_ENABLE_GLIBCXX_DEBUGGING_TRUE='' LIBMESH_ENABLE_GLPK_FALSE='' LIBMESH_ENABLE_GLPK_TRUE='' LIBMESH_ENABLE_GMV_FALSE='' LIBMESH_ENABLE_GMV_TRUE='' LIBMESH_ENABLE_GZSTREAMS_FALSE='' LIBMESH_ENABLE_GZSTREAMS_TRUE='' LIBMESH_ENABLE_HDF5_FALSE='' LIBMESH_ENABLE_HDF5_TRUE='' LIBMESH_ENABLE_INFINITE_ELEMENTS_FALSE='' LIBMESH_ENABLE_INFINITE_ELEMENTS_TRUE='' LIBMESH_ENABLE_LASPACK_FALSE='' LIBMESH_ENABLE_LASPACK_TRUE='' LIBMESH_ENABLE_LIBHILBERT_FALSE='' LIBMESH_ENABLE_LIBHILBERT_TRUE='' LIBMESH_ENABLE_METAPHYSICL_FALSE='' LIBMESH_ENABLE_METAPHYSICL_TRUE='' LIBMESH_ENABLE_METIS_FALSE='' LIBMESH_ENABLE_METIS_TRUE='' LIBMESH_ENABLE_NANOFLANN_FALSE='' LIBMESH_ENABLE_NANOFLANN_TRUE='' LIBMESH_ENABLE_NEMESIS_FALSE='' LIBMESH_ENABLE_NEMESIS_TRUE='' LIBMESH_ENABLE_NEMESIS_V309_FALSE='' LIBMESH_ENABLE_NEMESIS_V309_TRUE='' LIBMESH_ENABLE_NEMESIS_V522_FALSE='' LIBMESH_ENABLE_NEMESIS_V522_TRUE='' LIBMESH_ENABLE_NETCDF_FALSE='' LIBMESH_ENABLE_NETCDF_TRUE='' LIBMESH_ENABLE_NETCDF_V4_FALSE='' LIBMESH_ENABLE_NETCDF_V4_TRUE='' LIBMESH_ENABLE_NLOPT_FALSE='' LIBMESH_ENABLE_NLOPT_TRUE='' LIBMESH_ENABLE_PARMETIS_FALSE='' LIBMESH_ENABLE_PARMETIS_TRUE='' LIBMESH_ENABLE_PETSC_FALSE='' LIBMESH_ENABLE_PETSC_TRUE='' LIBMESH_ENABLE_QHULL_FALSE='' LIBMESH_ENABLE_QHULL_TRUE='' LIBMESH_ENABLE_SFC_FALSE='' LIBMESH_ENABLE_SFC_TRUE='' LIBMESH_ENABLE_SLEPC_FALSE='' LIBMESH_ENABLE_SLEPC_TRUE='' LIBMESH_ENABLE_TECIO_FALSE='' LIBMESH_ENABLE_TECIO_TRUE='' LIBMESH_ENABLE_TECPLOT_FALSE='' LIBMESH_ENABLE_TECPLOT_TRUE='' LIBMESH_ENABLE_TETGEN_FALSE='' LIBMESH_ENABLE_TETGEN_TRUE='' LIBMESH_ENABLE_TRIANGLE_FALSE='' LIBMESH_ENABLE_TRIANGLE_TRUE='' LIBMESH_ENABLE_VTK_FALSE='' LIBMESH_ENABLE_VTK_TRUE='' LIBMESH_INSTALL_INTERNAL_BOOST_FALSE='' LIBMESH_INSTALL_INTERNAL_BOOST_TRUE='' LIBMESH_INSTALL_INTERNAL_EIGEN_FALSE='' LIBMESH_INSTALL_INTERNAL_EIGEN_TRUE='' LIBMESH_OPROF_MODE_FALSE='' LIBMESH_OPROF_MODE_TRUE='' LIBMESH_OPT_MODE_FALSE='' LIBMESH_OPT_MODE_TRUE='' LIBMESH_PROF_MODE_FALSE='' LIBMESH_PROF_MODE_TRUE='' LIBMESH_VPATH_BUILD_FALSE='' LIBMESH_VPATH_BUILD_TRUE='#' LIBOBJS='' LIBS='' LIBTOOL='' LIPO='' LN_S='' LOCAL_CXX='' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /home/mpovolo1/Work/atom.git/trunk/libs/libmesh/libmesh-1.6.0/build-aux/missing makeinfo' MANIFEST_TOOL='' METAPHYSICL_INCLUDE='' METHOD='' METHODS='' METIS_INCLUDE='' METIS_LIB='' MKDIR_P='/usr/bin/mkdir -p' ML_INCLUDES='' ML_LIBS='' ML_MAKEFILE_EXPORT='' MPCXX='' MPI_IMPL='' MPI_INCLUDES='' MPI_LDFLAGS='' MPI_LIBS='' NANOFLANN_INCLUDE='' NEMESIS_INCLUDE='' NETCDF_INCLUDE='' NLOPT_INCLUDE='' NLOPT_LIBRARY='' NM='' NMEDIT='' NODEPRECATEDFLAG='' NOX_INCLUDES='' NOX_LIBS='' NOX_MAKEFILE_EXPORT='' OBJDUMP='' OBJEXT='o' OPENMP_CFLAGS='' OPENMP_CXXFLAGS='' OPENMP_FFLAGS='' OPROFILE_FLAGS='' OTOOL64='' OTOOL='' PACKAGE='libmesh' PACKAGE_BUGREPORT='libmesh-users@lists.sourceforge.net' PACKAGE_NAME='libmesh' PACKAGE_STRING='libmesh 1.6.0' PACKAGE_TARNAME='libmesh' PACKAGE_URL='http://libmesh.github.io' PACKAGE_VERSION='1.6.0' PARMETIS_INCLUDE='' PARMETIS_LIB='' PATH_SEPARATOR=':' PERL='/usr/bin/perl' PETSCARCH='' PETSCINCLUDEDIRS='' PETSCLINKLIBS='' PETSC_ARCH='linux' PETSC_CC_INCLUDES='' PETSC_DIR='/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' PETSC_FC_INCLUDES='' PKG_CONFIG='' PROFILING_FLAGS='' PRTDIAG='' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' PWD='/home/mpovolo1/Work/atom.git/trunk/libs/libmesh/libmesh-1.6.0' QHULL_LIBS='' RANLIB='' RPATHFLAG='' SED='/usr/bin/sed' SET_MAKE='' SFC_INCLUDE='' SFC_LIB='' SHELL='/bin/sh' SLEPC_DIR='/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real' SLEPC_INCLUDE='' SLEPC_LIBS='' STRIP='' TBB_INCLUDE='' TBB_LIBRARY='' TECIO_CPPFLAGS='' TECIO_INCLUDE='' TETGEN_INCLUDE='' TETGEN_LIBRARY='' TPETRA_INCLUDES='' TPETRA_LIBS='' TPETRA_MAKEFILE_EXPORT='' TRIANGLE_INCLUDE='' TRIANGLE_LIBRARY='' TRILINOS_DIR='' TRILINOS_INCLUDES='' TRILINOS_LIBS='' TRILINOS_MAKEFILE_EXPORT='' VERSION='1.6.0' VTK_DIR='' VTK_INCLUDE='' VTK_LIBRARY='' XZ='' YACC='' YFLAGS='' ac_ct_AR='' ac_ct_CC='' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='false' am__untar='false' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enabledeprecated='' enablefwdenums='' enablelegacyincludepaths='' enablepetsc='no' enableuniqueptr='' enablewarnings='' exec_prefix='NONE' gitquery='' have_gcov='' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/mpovolo1/Work/atom.git/trunk/libs/libmesh/libmesh-1.6.0/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' libmesh_CFLAGS='' libmesh_CPPFLAGS='-fPIC' libmesh_CXXFLAGS='-DMPICH_IGNORE_CXX_SEEK' libmesh_LDFLAGS='' libmesh_contrib_INCLUDES='' libmesh_installed_LIBS='' libmesh_optional_INCLUDES='' libmesh_optional_LIBS='' libmesh_pkgconfig_requires='' libmesh_precision_LIBS='' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' petscmajor='' petscmajorminor='' petscminor='' petscversion='' prefix='NONE' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' vtkbuild='' vtkmajor='' vtkversion='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "libmesh" #define PACKAGE_TARNAME "libmesh" #define PACKAGE_VERSION "1.6.0" #define PACKAGE_STRING "libmesh 1.6.0" #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" #define PACKAGE_URL "http://libmesh.github.io" #define CONFIGURE_INFO "./configure 'PETSC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/petsc/build-real' 'MPIHOME=/packages/7x/openmpi/agave/3.1.6/gcc/9.2.0' 'PETSC_ARCH=linux' 'F77=mpif77' 'CC=mpicc' 'GCC=gcc' 'CXX=mpicxx' '--enable-vtk' '--with-vtk-include=/packages/vtk/5.6.1/include/vtk-5.6' '--with-vtk-lib=/packages/vtk/5.6.1/lib/vtk-5.6' '--disable-tetgen' '--disable-nemesis' '--enable-parmesh' '--enable-amr' '--enable-shared=yes' '--disable-cxx11' '--enable-legacy-include-paths' '--disable-strict-lgpl' '--with-methods=opt' '--disable-examples' '--enable-slepc' 'CFLAGS=-Wall -fPIC -Wno-unused-local-typedefs -felide-constructors -funroll-loops -fstrict-aliasing -DMPICH_IGNORE_CXX_SEEK -fopenmp -DNO_SILO ' 'LDFLAGS=' 'FC=/packages/7x/gcc/gcc-9.2.0/bin/gfortran' 'libmesh_CPPFLAGS=-fPIC' 'libmesh_CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK' 'SLEPC_DIR=/home/mpovolo1/Work/atom.git/trunk/libs/slepc/build-real'" #define PACKAGE "libmesh" #define VERSION "1.6.0" configure: exit 1
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