Google fu had this:  
https://social.technet.microsoft.com/Forums/en-US/7e017afd-cdc8-4387-863e-da7bbd74bad8/sccm-2012-r2-wsus-clients-not-updating-after-upgrading-to-cmr2?forum=configmanagersecurity
  Seems pretty complex, but maybe?
Also possibly... some wacked GPO that is hitting 40% of your clients for WSUS 
settings, but not the other 60%?
in windowsupdate.log, what's the EXACT error message there? Especially the 
0x800Whatever error code?  about 80% of the time when I'm t-shooting strange CM 
Software Update issues, it's really the WSUS error codes that lead me to the 
solution, not the CM error codes. 
Not enough storage usually really means memory issues.  there was an update to 
the Windows Update Agent (for Windows 7) in June, and then another one just a 
few weeks ago.  If these are Win 7 targets, do they have the latest WUAgent 
(which is supposed to help w/memory issues) ?
 

    On Tuesday, December 22, 2015 2:22 PM, "Taxter, Latisha" <[email protected]> 
wrote:
 

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{}-->Sccm 2012 R2 SP2.     About 40 % of clients fail scan with error “not 
enough storage available to complete operation”.     Ran wsus cleanup wizard. 
Number of updates in deployment package is under 1000. Scanagent.log on a 
working client has no errors.  On a client that failed, “Sources are current, 
but Invalid. TTL is also invalid.”    Any pointers on this will be appreciated. 
      Latisha Taxter Server Administrator III 
Kootenai Health 2003 Kootenai Health Way Coeur D’Alene, Idaho 83814 ( 
208-625-4192
[email protected] kootenaihealthit.org        


  


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