> I was also hoping to control other files. Can I have LyX keep other output 
> and aux files, so that latex and bibtex can run fewer times and produce the 
> output faster (example, references and bibs). My understanding is that 
> everything is wiped out if I close and reopen. This can waste time, 


I am very well acquainted with this particular complaint.  I've been working on 
a book draft that has several thousand pictures (screenshots, example mockups, 
etc).  Building the entire draft can take on the order of 15 - 20 minutes.  If 
there was a way not to have to start over every time I run xelatex, that would 
be marvelous.

To the best of my knowledge, I don't believe that such a setting exists  
However, this might be a very worthwhile request and I'm not sure that it would 
take a lot of effort to implement it.  Perhaps it might be included in the 
upcoming LyX 2?  You might consider filing a feature request on the LyX 
bugtracker.  If you have any experience with C++, I'm sure that any 
contributions you might make would be welcomed with open arms.

I've been working on some enhancements to the LyX outline pane (for more info, 
see http://blog.oak-tree.us/index.php/2010/05/24/lyx-outline02) and from 
personal experience, I can confirm that the core developers are extremely 
friendly, helpful, and patient.

(If anyone is aware of a setting that I've missed, this is something that I 
would *love* to be wrong about.)

Cheers,

Rob

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