From: Jake Mannix <[email protected]>
To: [email protected]
Sent: Tue, December 8, 2009 10:05:50 PM
Subject: Re: Fwd: A MapReduce Algorithm for Matrix Multiplication

On Tue, Dec 8, 2009 at 6:47 PM, Zhengguo 'Mike' SUN
<[email protected]>wrote:

> Hi Jake,
>
> I am implementing the classical multiplicative update rule of NMF. The
> matrix to be factorized is really big and sparse. Are you suggesting that I
> can use some specialised algorithms for sparse matrix instead of the
> standard multiplication algorithm? But what algorithms are you referring to?
> Could you please provide some pointers?
>

So given your input matrix X, you're trying to find non-negative matrices W
(thin matrix, with few long dense columns) and H (wide matrix, with few long
dense rows) which minimize || X - WH ||, right, where || * || is the
Froebenius norm, right?

Yes.

I'm just suggesting that you don't even compute entries in X - WH where X
has missing data - optimize treating those values as unknown, not "zero".

No, I am not computing entries in X-WH. I am doing iterations on the following 
two rules:

H <- H*(WtX)/(WtWH),      W<- W*(XHt)/(WHHt)

The detailed algorithm is presented in this paper:

http://www.nips.cc/Web/Groups/NIPS/NIPS2000/00papers-pub-on-web/LeeSeung.ps.gz

  -jake



      

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