[
https://issues.apache.org/jira/browse/MAPREDUCE-7026?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Prabhu Joseph updated MAPREDUCE-7026:
-------------------------------------
Description:
A job is failing with reduce tasks failed to fetch map output and the
NodeManager ShuffleHandler failed to serve the map outputs with some
IOException like below. ShuffleHandler sends the actual error message in
response inside sendError() but the Fetcher does not log this message.
Logs from NodeManager ShuffleHandler:
{code}
2017-12-18 10:10:30,728 ERROR mapred.ShuffleHandler
(ShuffleHandler.java:messageReceived(962)) - Shuffle error in populating
headers :
java.io.IOException: Error Reading IndexFile
at
org.apache.hadoop.mapred.ShuffleHandler$Shuffle.populateHeaders(ShuffleHandler.java:1089)
at
org.apache.hadoop.mapred.ShuffleHandler$Shuffle.messageReceived(ShuffleHandler.java:958)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.handler.stream.ChunkedWriteHandler.handleUpstream(ChunkedWriteHandler.java:142)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.handler.codec.http.HttpChunkAggregator.messageReceived(HttpChunkAggregator.java:148)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:296)
at
org.jboss.netty.handler.codec.frame.FrameDecoder.unfoldAndFireMessageReceived(FrameDecoder.java:459)
at
org.jboss.netty.handler.codec.replay.ReplayingDecoder.callDecode(ReplayingDecoder.java:536)
at
org.jboss.netty.handler.codec.replay.ReplayingDecoder.messageReceived(ReplayingDecoder.java:435)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:555)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:268)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:255)
at org.jboss.netty.channel.socket.nio.NioWorker.read(NioWorker.java:88)
at
org.jboss.netty.channel.socket.nio.AbstractNioWorker.process(AbstractNioWorker.java:107)
at
org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:312)
at
org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:88)
at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
at
org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
at
org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.IOException: Owner 'hbase' for path
/grid/7/hadoop/yarn/local/usercache/bde/appcache/application_1512457770852_9447/output/attempt_1512457770852_9447_1_01_000007_0_10004/file.out.index
did not match expected owner 'bde'
at org.apache.hadoop.io.SecureIOUtils.checkStat(SecureIOUtils.java:285)
at
org.apache.hadoop.io.SecureIOUtils.forceSecureOpenFSDataInputStream(SecureIOUtils.java:174)
at
org.apache.hadoop.io.SecureIOUtils.openFSDataInputStream(SecureIOUtils.java:158)
at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:70)
at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:62)
at
org.apache.hadoop.mapred.IndexCache.readIndexFileToCache(IndexCache.java:119)
{code}
Fetcher Logs below without the actual error message:
{code}
2018-04-19 12:24:39,521 WARN [main] org.apache.hadoop.mapred.YarnChild:
Exception running child :
org.apache.hadoop.mapreduce.task.reduce.Shuffle$ShuffleError: error in shuffle
in fetcher#3
at org.apache.hadoop.mapreduce.task.reduce.Shuffle.run(Shuffle.java:134)
at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:376)
at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:170)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1866)
at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:164)
Caused by: java.io.IOException: Exceeded MAX_FAILED_UNIQUE_FETCHES; bailing-out.
at
org.apache.hadoop.mapreduce.task.reduce.ShuffleSchedulerImpl.checkReducerHealth(ShuffleSchedulerImpl.java:366)
at
org.apache.hadoop.mapreduce.task.reduce.ShuffleSchedulerImpl.copyFailed(ShuffleSchedulerImpl.java:288)
at
org.apache.hadoop.mapreduce.task.reduce.Fetcher.copyFromHost(Fetcher.java:369)
at org.apache.hadoop.mapreduce.task.reduce.Fetcher.run(Fetcher.java:200)
{code}
was:
A job is failing with reduce tasks failed to fetch map output and the
NodeManager ShuffleHandler failed to serve the map outputs with some
IOException like below. ShuffleHandler sends the actual error message in
response inside sendError() but the Fetcher does not log this message.
Logs from NodeManager ShuffleHandler:
{code}
2017-12-18 10:10:30,728 ERROR mapred.ShuffleHandler
(ShuffleHandler.java:messageReceived(962)) - Shuffle error in populating
headers :
java.io.IOException: Error Reading IndexFile
at
org.apache.hadoop.mapred.ShuffleHandler$Shuffle.populateHeaders(ShuffleHandler.java:1089)
at
org.apache.hadoop.mapred.ShuffleHandler$Shuffle.messageReceived(ShuffleHandler.java:958)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.handler.stream.ChunkedWriteHandler.handleUpstream(ChunkedWriteHandler.java:142)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.handler.codec.http.HttpChunkAggregator.messageReceived(HttpChunkAggregator.java:148)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:296)
at
org.jboss.netty.handler.codec.frame.FrameDecoder.unfoldAndFireMessageReceived(FrameDecoder.java:459)
at
org.jboss.netty.handler.codec.replay.ReplayingDecoder.callDecode(ReplayingDecoder.java:536)
at
org.jboss.netty.handler.codec.replay.ReplayingDecoder.messageReceived(ReplayingDecoder.java:435)
at
org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
at
org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:555)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:268)
at
org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:255)
at org.jboss.netty.channel.socket.nio.NioWorker.read(NioWorker.java:88)
at
org.jboss.netty.channel.socket.nio.AbstractNioWorker.process(AbstractNioWorker.java:107)
at
org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:312)
at
org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:88)
at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
at
org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
at
org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.IOException: Owner 'hbase' for path
/grid/7/hadoop/yarn/local/usercache/bde/appcache/application_1512457770852_9447/output/attempt_1512457770852_9447_1_01_000007_0_10004/file.out.index
did not match expected owner 'bde'
at org.apache.hadoop.io.SecureIOUtils.checkStat(SecureIOUtils.java:285)
at
org.apache.hadoop.io.SecureIOUtils.forceSecureOpenFSDataInputStream(SecureIOUtils.java:174)
at
org.apache.hadoop.io.SecureIOUtils.openFSDataInputStream(SecureIOUtils.java:158)
at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:70)
at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:62)
at
org.apache.hadoop.mapred.IndexCache.readIndexFileToCache(IndexCache.java:119)
{code}
Fetcher Logs below without the actual error message:
{code}
2018-04-19 12:24:39,511 WARN [fetcher#3]
org.apache.hadoop.mapreduce.task.reduce.Fetcher: Invalid map id
java.lang.IllegalArgumentException: TaskAttemptId string : TTP/1.1 500 Internal
Server Error
Content-Type: text/plain; charset=UTF is not properly formed
at
org.apache.hadoop.mapreduce.TaskAttemptID.forName(TaskAttemptID.java:201)
at
org.apache.hadoop.mapreduce.task.reduce.Fetcher.copyMapOutput(Fetcher.java:517)
at
org.apache.hadoop.mapreduce.task.reduce.Fetcher.copyFromHost(Fetcher.java:345)
at org.apache.hadoop.mapreduce.task.reduce.Fetcher.run(Fetcher.java:200)
{code}
> Shuffle Fetcher does not log the actual error message thrown by ShuffleHandler
> ------------------------------------------------------------------------------
>
> Key: MAPREDUCE-7026
> URL: https://issues.apache.org/jira/browse/MAPREDUCE-7026
> Project: Hadoop Map/Reduce
> Issue Type: Bug
> Components: task
> Affects Versions: 2.7.3
> Reporter: Prabhu Joseph
> Assignee: Prabhu Joseph
> Priority: Major
> Labels: supportability
> Attachments: MAPREDUCE-7026.1.patch, MAPREDUCE-7026.2.patch
>
>
> A job is failing with reduce tasks failed to fetch map output and the
> NodeManager ShuffleHandler failed to serve the map outputs with some
> IOException like below. ShuffleHandler sends the actual error message in
> response inside sendError() but the Fetcher does not log this message.
> Logs from NodeManager ShuffleHandler:
> {code}
> 2017-12-18 10:10:30,728 ERROR mapred.ShuffleHandler
> (ShuffleHandler.java:messageReceived(962)) - Shuffle error in populating
> headers :
> java.io.IOException: Error Reading IndexFile
> at
> org.apache.hadoop.mapred.ShuffleHandler$Shuffle.populateHeaders(ShuffleHandler.java:1089)
> at
> org.apache.hadoop.mapred.ShuffleHandler$Shuffle.messageReceived(ShuffleHandler.java:958)
> at
> org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
> at
> org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
> at
> org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
> at
> org.jboss.netty.handler.stream.ChunkedWriteHandler.handleUpstream(ChunkedWriteHandler.java:142)
> at
> org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
> at
> org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
> at
> org.jboss.netty.handler.codec.http.HttpChunkAggregator.messageReceived(HttpChunkAggregator.java:148)
> at
> org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
> at
> org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
> at
> org.jboss.netty.channel.DefaultChannelPipeline$DefaultChannelHandlerContext.sendUpstream(DefaultChannelPipeline.java:787)
> at
> org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:296)
> at
> org.jboss.netty.handler.codec.frame.FrameDecoder.unfoldAndFireMessageReceived(FrameDecoder.java:459)
> at
> org.jboss.netty.handler.codec.replay.ReplayingDecoder.callDecode(ReplayingDecoder.java:536)
> at
> org.jboss.netty.handler.codec.replay.ReplayingDecoder.messageReceived(ReplayingDecoder.java:435)
> at
> org.jboss.netty.channel.SimpleChannelUpstreamHandler.handleUpstream(SimpleChannelUpstreamHandler.java:70)
> at
> org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:560)
> at
> org.jboss.netty.channel.DefaultChannelPipeline.sendUpstream(DefaultChannelPipeline.java:555)
> at
> org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:268)
> at
> org.jboss.netty.channel.Channels.fireMessageReceived(Channels.java:255)
> at
> org.jboss.netty.channel.socket.nio.NioWorker.read(NioWorker.java:88)
> at
> org.jboss.netty.channel.socket.nio.AbstractNioWorker.process(AbstractNioWorker.java:107)
> at
> org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:312)
> at
> org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:88)
> at
> org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
> at
> org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
> at
> org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.io.IOException: Owner 'hbase' for path
> /grid/7/hadoop/yarn/local/usercache/bde/appcache/application_1512457770852_9447/output/attempt_1512457770852_9447_1_01_000007_0_10004/file.out.index
> did not match expected owner 'bde'
> at
> org.apache.hadoop.io.SecureIOUtils.checkStat(SecureIOUtils.java:285)
> at
> org.apache.hadoop.io.SecureIOUtils.forceSecureOpenFSDataInputStream(SecureIOUtils.java:174)
> at
> org.apache.hadoop.io.SecureIOUtils.openFSDataInputStream(SecureIOUtils.java:158)
> at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:70)
> at org.apache.hadoop.mapred.SpillRecord.<init>(SpillRecord.java:62)
> at
> org.apache.hadoop.mapred.IndexCache.readIndexFileToCache(IndexCache.java:119)
> {code}
> Fetcher Logs below without the actual error message:
> {code}
> 2018-04-19 12:24:39,521 WARN [main] org.apache.hadoop.mapred.YarnChild:
> Exception running child :
> org.apache.hadoop.mapreduce.task.reduce.Shuffle$ShuffleError: error in
> shuffle in fetcher#3
> at
> org.apache.hadoop.mapreduce.task.reduce.Shuffle.run(Shuffle.java:134)
> at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:376)
> at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:170)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1866)
> at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:164)
> Caused by: java.io.IOException: Exceeded MAX_FAILED_UNIQUE_FETCHES;
> bailing-out.
> at
> org.apache.hadoop.mapreduce.task.reduce.ShuffleSchedulerImpl.checkReducerHealth(ShuffleSchedulerImpl.java:366)
> at
> org.apache.hadoop.mapreduce.task.reduce.ShuffleSchedulerImpl.copyFailed(ShuffleSchedulerImpl.java:288)
> at
> org.apache.hadoop.mapreduce.task.reduce.Fetcher.copyFromHost(Fetcher.java:369)
> at
> org.apache.hadoop.mapreduce.task.reduce.Fetcher.run(Fetcher.java:200)
> {code}
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